Job Description P76350 Confidence 8.99% Date Thu Jan 5 12:22:14 GMT 2012 Rank 9 Aligned Residues 220 % Identity 7% Template c3hd6A_ PDB info PDB header:membrane protein, transport protein Chain: A: PDB Molecule:ammonium transporter rh type c; PDBTitle: crystal structure of the human rhesus glycoprotein rhcg Resolution 2.10 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	T	R	P	D	E	G	T	L	S	L	S	R	A	R	R	A	A	L	G	S	F	A	G	A	V	V	D	W	Y	D	F	L	L	Y	G	I	T	A	A	L	V	F	N	R	E	F	F	P	Q	V	S	P	A	M	G	T	L	A	A	F	A	T	F	G	V	G	F	L	F	R	P	L	G	G	V	I	F	G	H
Query Conservation
Alig confidence																																						.	.	.	.	.	.	.																										.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.																										.	.	.	.
Template Sequence		R	R	N	L	E	Q	S	K	E	R	Q	N	S	V	Y	Q	S	D	L	F	A	M	I	G	T	L	F	L	W	M	Y	W	P	S	F	N	.	.	.	.	.	.	.	S	A	I	S	Y	H	G	D	S	Q	H	R	A	A	I	N	T	Y	C	S	L	A	A	C	V	.	.	.	.	L	T	S	V	A	I	S	S
Template Known Secondary structure			T	T	G	G	G	G	T	T	T	S	S																								T	.	.	.	.	.	.	.	T	T	T		S	S																				.	.	.	.
Template Predicted Secondary structure																																						.	.	.	.	.	.	.																										.	.	.	.
Template SS confidence
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.								.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.					.	.	.	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	G	D	R	L	G	R	K	R	M	L	M	L	T	V	W	M	M	G	I	A	T	A	L	I	G	I	L	P	S	F	S	T	I	G	W	W	A	P	I	L	L	V	T	L	R	A	I	Q	G	F	A	V	G	G	E	W	G	G	A	A	L	L	S	V	E	S	A	P	K	N	K	K	A	F	Y	S	S	G	V
Query Conservation
Alig confidence																																			.	.	.	.	.
Template Conservation																																			.	.	.	.	.
Template Sequence		A	L	H	K	K	G	K	L	D	M	V	H	I	Q	N	A	T	L	A	G	G	V	A	V	G	T	A	A	E	M	M	L	M	.	.	.	.	.	P	Y	G	A	L	I	I	G	F	V	C	G	I	I	S	T	L	G	F	V	Y	L	T	P	F	L	E	S	R	L	H	I	Q	D	T	C	G	I	N	N	L	H
Template Known Secondary structure			T	S	T	T											G	G	G						T	T	T	T	T	T	T		S		.	.	.	.	.																																			T	T						T
Template Predicted Secondary structure																																			.	.	.	.	.
Template SS confidence
		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.						.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	V	G	Y	G	V	G	L	L	L	S	T	G	L	V	S	L	I	S	M	M	T	T	D	E	Q	F	L	S	W	G	W	R	I	P	F	L	F	S	I	V	L	V	L	G	A	L	W	V	R	N	G	M	E	E	S	A	E	F	E	Q	Q	Q	H	Y	Q	A	A	A	K	K	R	I	P	V	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	I	P	G	I	I	G	G	I	V	G	A	V	T	A	A	S	D	W	T	A	R	T	Q	G	K	F	Q	I	Y	G	L	L	V	T	L	A	M	A	L	M	G	G	I	I	V	G	L	I	L	R	L	P	F	W	G	Q	P	S	D	E	N	C	F	E	D	A	V	Y	W	E	M	P	E	G	N
Template Known Secondary structure																																																				T	S	T	T	S					T	T	S	T	T		G	G	G	T	S				T	T	T
Template Predicted Secondary structure
Template SS confidence
		345	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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