Job Description P76350 Confidence 32.70% Date Thu Jan 5 12:22:14 GMT 2012 Rank 6 Aligned Residues 223 % Identity 14% Template c3b9yA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:ammonium transporter family rh-like protein; PDBTitle: crystal structure of the nitrosomonas europaea rh protein Resolution 1.85 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	P	D	E	G	T	L	S	L	S	R	A	R	R	A	A	L	G	S	F	A	G	A	V	V	D	W	Y	D	F	L	L	Y	G	I	T	A	A	L	V	F	N	R	E	F	F	P	Q	V	S	P	A	M	G	T	L	A	A	F	A	T	F	G	V	G	F	L	F	R	P	L	G	G	V	I	F	G	H	F	G
Query Conservation
Alig confidence																																								.	.	.	.	.	.	.	.																					.	.	.	.
Template Conservation																																								.	.	.	.	.	.	.	.																					.	.	.	.
Template Sequence		T	A	A	Q	R	A	Q	P	I	E	S	D	A	T	S	D	R	F	S	M	L	G	S	M	V	L	W	L	F	W	P	S	F	A	T	A	I	V	.	.	.	.	.	.	.	.	P	F	E	Q	M	P	Q	T	I	V	N	T	L	L	A	L	C	G	A	T	.	.	.	.	L	A	T	Y	F	L	S	A	L	F
Template Known Secondary structure							T	S																													T	T	S	.	.	.	.	.	.	.	.		G	G	G																	.	.	.	.
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.																					.	.	.	.
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.									.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.					.	.	.	.	.	.	250	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	R	L	G	R	K	R	M	L	M	L	T	V	W	M	M	G	I	A	T	A	L	I	G	I	L	P	S	F	S	T	I	G	W	W	A	P	I	L	L	V	T	L	R	A	I	Q	G	F	A	V	G	G	E	W	G	G	A	A	L	L	S	V	E	S	A	P	K	N	K	K	A	F	Y	S	S	G	V	Q	V
Query Conservation
Alig confidence				.	.																												.	.	.	.	.	.	.	.	.
Template Conservation				.	.																												.	.	.	.	.	.	.	.	.
Template Sequence		H	K	.	.	G	K	A	S	I	V	D	M	A	N	A	A	L	A	G	G	V	A	I	G	S	V	C	N	I	V	G	.	.	.	.	.	.	.	.	.	P	V	G	A	F	V	I	G	L	L	G	G	A	I	S	V	V	G	F	V	F	I	Q	P	M	L	E	S	K	A	K	T	I	D	T	C	G	V	H	N
Template Known Secondary structure		T	T	.	.	T											T	T							T	T	T	T	T	T	S		.	.	.	.	.	.	.	.	.																					T									S					T	T
Template Predicted Secondary structure				.	.																												.	.	.	.	.	.	.	.	.
Template SS confidence
		254	.			.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.										.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Y	G	V	G	L	L	L	S	T	G	L	V	S	L	I	S	M	M	T	T	D	E	Q	F	L	S	W	G	W	R	I	P	F	L	F	S	I	V	L	V	L	G	A	L	W	V	R	N	G	M	E	E	S	A	E	F	E	Q	Q	Q	H	Y	Q	A	A	A	K	K	R	I	P	V	I	E	A	L	L	R	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	H	G	L	P	G	L	L	G	G	F	S	A	I	L	I	V	P	G	I	A	V	A	Q	L	T	G	I	G	I	T	L	A	L	A	L	I	G	G	V	I	A	G	A	L	I	K	L	T	G	T	T	K	Q	A	Y	E	D	S	H	E	F	I	H	L	A	G	P	E	D	E	H	K	A	E	R	L	V	L	E
Template Known Secondary structure			T	T														S	T	T																													T	T				S	S	T	T		G	G	G	T	S	S	S				G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.
		249	250	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	G	A	F	L	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	K	T	E	I	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		403	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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