Return to main results Retrieve Phyre Job Id

Job DescriptionP06720
Confidence100.00%DateThu Jan 5 10:59:23 GMT 2012
Rank39Aligned Residues161
% Identity25%Templated1up7a1
SCOP infoNAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains LDH N-terminal domain-like
Resolution2.4

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40.........50.........60.........70.........80.....
Predicted Secondary structure 

























Query SS confidence 















































































Query Sequence  KITFIGAGSTIFVKNILGDVFHREALKTAHIALMDIDPTRLEESHIVVRKLMDSAGASGKITCHTQQKEALEDADFVVVA
Query Conservation 

 





          
     
   



 


  

                   
  


   

 





 
Alig confidence 





















































...






















Template Conservation 

 




 

       
          

 
 

                  ...   
  
     

 







Template Sequence  RIAVIGGGSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKD. . . RFKVLISDTFEGAVVDAKYVIFQ
Template Known Secondary structure  TTT
TTTTTS



S
TT...SS
SSTT
S
Template Predicted Secondary structure 
















...








Template SS confidence 















































































   2.......10.........20.........30.........40.........50..... ....60.........70........
 
   86...90.........100.........110.........120.........130.........140.........150.........160.....
Predicted Secondary structure 





























Query SS confidence 















































































Query Sequence  FQIGGYEPCTVTDFEVCKRHGLEQTIADTLGPGGIMRALRTIPHLWQICEDMTEVCPDATMLNYVNPMAMNTWAMYARYP
Query Conservation   



    
  

 

 
 
  
   

 
 

   
 




   

  
   

 




 


  


 

     
Alig confidence 






.













..





























.
























Template Conservation 
      .    
   
 
 
 .. 
 
            
  
   
   
  . 
 
  
 





  
        
Template Sequence  FRPGGLK. GRENDEGIPLKYGL. . IGQETTGVGGFSAALRAFPIVEEYVDTVRK. TSNATIVNFTNPSGHITEFVRNYLE
Template Known Secondary structure 

TT.GGGGGT
..


SSST.TT


SSSTT
Template Predicted Secondary structure 






.




..




.







Template SS confidence 















































































   7980..... ....90......... 100.........110.........120......... 130.........140.........150....
 
   166...170...
Predicted Secondary structure 



Query SS confidence 







Query Sequence  HIKQVGLC
Query Conservation    





Alig confidence 







Template Conservation    





Template Sequence  YEKFIGLC
Template Known Secondary structure 
SS

Template Predicted Secondary structure 



Template SS confidence 







   155....160..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions