Job Description P06720 Confidence 88.98% Date Thu Jan 5 10:59:23 GMT 2012 Rank 458 Aligned Residues 133 % Identity 16% Template d1uira_ SCOP info S-adenosyl-L-methionine-dependent methyltransferases S-adenosyl-L-methionine-dependent methyltransferases Spermidine synthase Resolution 2.00

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.			.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																								.	.																								.
Query SS confidence																																																								.	.																								.
Query Sequence		S	A	P	K	I	T	F	I	G	A	G	S	T	I	F	V	K	N	I	L	G	D	V	F	H	R	E	A	L	K	T	A	H	I	A	L	M	D	I	D	P	T	R	L	E	E	S	H	I	V	V	R	K	L	.	.	M	D	S	A	G	A	S	G	K	I	T	C	H	T	Q	Q	K	E	A	L	E	D	A	.
Query Conservation																																																								.	.																								.
Alig confidence																						.	.	.	.	.	.																													.	.													.											.
Template Conservation																						.	.	.	.	.	.																																											.
Template Sequence		E	P	K	R	V	L	I	V	G	G	G	E	G	A	T	L	R	E	V	L	.	.	.	.	.	.	K	H	P	T	V	E	K	A	V	M	V	D	I	D	G	E	L	V	E	V	A	K	R	H	M	P	E	W	H	Q	G	A	F	D	D	P	R	A	V	L	V	I	.	D	D	A	R	A	Y	L	E	R	T	E
Template Known Secondary structure												T	T	S							T	.	.	.	.	.	.	T	S	T	T									S																	T	T	G	G	G		T	T						.	S
Template Predicted Secondary structure																						.	.	.	.	.	.																																											.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.							.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.		.	140	.	.	.	.	.	.	.	.	.
					80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150						.
Predicted Secondary structure		.	.	.																																																																								.	.	.	.	.
Query SS confidence		.	.	.																																																																								.	.	.	.	.
Query Sequence		.	.	.	D	F	V	V	V	A	F	Q	I	G	G	Y	E	P	C	T	V	T	D	F	E	V	C	K	R	H	G	L	E	Q	T	I	A	D	T	L	G	P	G	G	I	M	R	A	L	R	T	I	P	H	L	W	Q	I	C	E	D	M	T	E	V	C	P	D	A	T	M	L	N	Y	V	.	.	.	.	.	N
Query Conservation		.	.	.																																																																								.	.	.	.	.
Alig confidence		.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.													.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.
Template Sequence		E	R	Y	D	V	V	I	I	D	L	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	P	V	G	E	D	N	P	A	R	L	L	Y	T	V	E	F	Y	R	L	V	K	A	.	.	.	H	L	N	P	G	G	V	M	G	M	Q	T	G	M	I	L	L	R
Template Known Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			B	S	T	T		G	G	G	G	G	S	S										.	.	.	T
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160																										.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.				.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure
Query SS confidence
Query Sequence		P	M	A	M	N	T	W	A	M	Y	A	R	Y	P	H	I	K	Q	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	H	P	V	V	H	R	T	V	R	E	A	F	R	Y	V	R	S	Y
Template Known Secondary structure												T	T		S
Template Predicted Secondary structure
Template SS confidence
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions