Job Description P06720 Confidence 100.00% Date Thu Jan 5 10:59:23 GMT 2012 Rank 7 Aligned Residues 262 % Identity 19% Template d1u8xx2 SCOP info LDH C-terminal domain-like LDH C-terminal domain-like AglA-like glucosidase Resolution 2.05

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		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.		.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.																						.
Query SS confidence																					.																						.
Query Sequence		L	C	H	S	V	Q	G	T	A	E	E	L	A	R	D	L	N	I	D	.	P	A	T	L	R	Y	R	C	A	G	I	N	H	M	A	F	Y	L	E	L	E	.	R	K	T	A	D	G	S	Y	V	N	L	Y	P	E	L	L	A	A	Y	E	A	G	Q	A	P	K	P	N	I	H	G	N	T	R	C	Q	N	I
Query Conservation																					.																						.
Alig confidence																					.																						.						.	.	.	.	.																	.	.	.	.	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.																	.	.	.	.	.	.	.	.	.
Template Sequence		I	C	D	X	P	V	G	I	E	D	R	X	A	Q	I	L	G	L	S	S	R	K	E	X	K	V	R	Y	Y	G	L	N	H	F	G	W	W	T	S	I	Q	D	Q	E	G	N	D	.	.	.	.	.	L	X	P	K	L	K	E	H	V	S	Q	Y	G	Y	I	P	.	.	.	.	.	.	.	.	.	K	T	S
Template Known Secondary structure				S														T		S		G	G	G									T	T										T	T			B	.	.	.	.	.													S	S			.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																	.	.	.	.	.																	.	.	.	.	.	.	.	.	.
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.						.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.										.	.	.
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320				.	.	.	.	.	.
Predicted Secondary structure																																																																									.	.	.
Query SS confidence																																																																									.	.	.
Query Sequence		V	R	Y	E	M	F	K	K	L	G	Y	F	V	T	E	S	S	E	H	F	A	E	Y	T	P	W	F	I	K	P	G	R	E	D	L	I	E	R	Y	K	V	P	L	D	E	Y	P	K	R	C	V	E	Q	L	A	N	W	H	K	E	L	E	E	Y	K	K	A	S	R	I	D	.	.	.	I	K	P	S	R	E
Query Conservation																																																																									.	.	.
Alig confidence																																																																									.	.	.
Template Conservation
Template Sequence		W	N	D	T	F	A	K	A	R	D	V	Q	A	A	D	P	D	T	L	P	N	T	Y	L	Q	Y	Y	L	F	P	D	D	X	V	K	K	S	N	P	N	H	T	R	A	N	E	V	X	E	G	R	E	A	F	I	F	S	Q	C	D	X	I	T	R	E	Q	S	S	E	N	S	E	I	K	I	D	D	H	A	S
Template Known Secondary structure		T	T	S											T	S	T	T	S				G	G	G					S						T	T	S		S	S	S										T	T	T	T	T	T	T	T								T	S			S		S	S				T	T	T
Template Predicted Secondary structure
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
		327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	A	S	T	I	M	N	A	I	W	T	G	E	P	S	V	I	Y	G	N	V	R	N	D	G	L	I	D	N	L	P	Q	G	C	C	V	E	V	A	C	L	V	D	A	N	G	I	Q	P	T	K	V	G	T	L	P	S	H	L	A	A	L	M	Q	T	N	I	N	V	Q	T	L	L	T	E	A	I	L	T	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	I	V	D	L	A	R	A	I	A	Y	N	T	G	E	R	X	L	L	I	V	E	N	N	G	A	I	A	N	F	D	P	T	A	X	V	E	V	P	C	I	V	G	S	N	G	P	E	P	I	T	V	G	T	I	P	Q	F	Q	K	G	L	X	E	Q	Q	V	S	V	E	K	L	T	V	E	A	W	A	E	K
Template Known Secondary structure													T												T	T	S	B	T	T	S		T	T	S										T	T								B																											T
Template Predicted Secondary structure
Template SS confidence
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.
		407	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450
Predicted Secondary structure
Query SS confidence
Query Sequence		N	R	D	R	V	Y	H	A	A	M	M	D	P	H	T	A	A	V	L	G	I	D	E	I	Y	A	L	V	D	D	L	I	A	A	H	G	D	W	L	P	G	W	L	H
Query Conservation
Alig confidence																				.	.	.
Template Conservation																				.	.	.
Template Sequence		S	F	Q	K	L	W	Q	A	L	I	L	S	K	T	V	P	N	A	.	.	.	R	V	A	R	L	I	L	E	D	L	V	E	A	N	K	D	F	W	P	E	L	D	Q
Template Known Secondary structure		B												T	T					.	.	.														T	T	T	T	S				B	S
Template Predicted Secondary structure																				.	.	.
Template SS confidence
		403	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420				.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions