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2 | . | . | . | |
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. | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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| . | . | . |  |  |  |  |  |
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|  |  |  |  |  |
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Query SS confidence |   |
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Query Sequence |   |
M | S | A | P | . |
. |
. |
K | I | T | F | I | G | A | G | S | T | I | F | V | K | N | I | L | G | D | V | F | H | R | E | A | L | K | T | A | H | I | A | L | M | D | I | D | P | T | R | L | E | E | S | H | I | V | V | R | K | L | M | D | S | A | G | A | S | G | K | I | T | C | H | T | Q | Q | K | E | A | L | E | D |
Query Conservation |   |
|   |   |   | . | . | . |
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|   |   |   |   |   |   |   |   |   |   |
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Alig confidence |   |
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| . | . | . |
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| . | . |
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Template Conservation |   |
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|   |   |   |   | . | . | . | . |   |   |   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   | . | . |   |   |   |   |   |   |
|   |   |   |
Template Sequence |   |
M | K | N | N | G | G | A | R | V | V | V | I | G | A | G | F | V | G | A | S | Y | V | F | A | L | M | N | Q | G | I | . |
. |
. |
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A | D | E | I | V | L | I | D | A | N | E | S | K | A | I | G | D | A | M | D | F | N | H | G | K | V | F | A | P | K | P | V | D | I | . |
. |
W | H | G | D | Y | D | D | C | R | D |
Template Known Secondary structure |   |
| T | T | T | T | S |
|  |  |  |  |  |
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| S |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| . | . | . | . |
| S |  |  |  |  |  |
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S | S | S | S |
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|  |  | . | . |  |  |
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| G | G | G | T | T | T |
Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
15 | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | |
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. | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | |
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. | 80 | . | . | . | . | . | . | . | . |
  |
  |   |
79 | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |
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Query SS confidence |   |
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Query Sequence |   |
A | D | F | V | V | V | A | F | Q | I | G | G | Y | E | P | C | T | V | T | D | F | E | V | C | K | R | H | G | L | E | Q | T | I | A | D | T | L | G | P | G | G | I | M | R | A | L | R | T | I | P | H | L | W | Q | I | C | E | D | M | T | E | V | C | P | D | A | T | M | L | N | Y | V | N | P | M | A | M | N | T | W |
Query Conservation |   |
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Alig confidence |   |
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| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
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Template Conservation |   |
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|   |   |   |   |   |   |   |   |
|   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |
|   |   |   |
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|   |   |   |   |   |   |
Template Sequence |   |
A | D | L | V | V | I | C | A | G | A | N | Q | K | P | G | E | T | R | L | D | . |
. |
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L | V | D | K | N | I | A | I | F | R | S | I | V | E | S | V | M | A | S | G | F | Q | G | L | F | L | V | A | T | N | P | V | D | I | L | T | Y |
Template Known Secondary structure |   |
| S |  |  |  |  |
|
| S |
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| T | T | T |
| S | G | G | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | G |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
| S |  |  |  |  |
| S | S | S |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
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|  |  |  |  |  |
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|  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |
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Template SS confidence |   |
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  |   |
89 | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | |
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. | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . |
  |
  |   |
159 | 160 | . | . | . | |
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. | . | . | . | . | . | 170 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  | . | . |
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|  |  |  |  |
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Query SS confidence |   |
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Query Sequence |   |
A | M | Y | A | R | . |
. |
Y | P | H | I | K | Q | V | G | L | C |
Query Conservation |   |
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|   |   |   | . | . |   |   |   |   |
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Alig confidence |   |
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| . | . |
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Template Conservation |   |
  |   |   |   |   |
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|   |
|   |   |   |
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|   |
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Template Sequence |   |
A | T | W | K | F | S | G | L | P | H | E | R | V | I | G | S | G |
Template Known Secondary structure |   |
 |  |  |  |  |  | T |
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| G | G | G |  |  |  |
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Template Predicted Secondary structure |   |
 |  |  |  |  |  |
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|  |  |  |  |
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Template SS confidence |   |
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  |   |
146 | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . |
  |