 |
Job Description | P06720 | Confidence | 93.50% | Date | Thu Jan 5 10:59:23 GMT 2012 |
Rank | 384 | Aligned Residues | 71 |
% Identity | 17% | Template | d1j6ua1 |
SCOP info | MurCD N-terminal domain
| MurCD N-terminal domain
| MurCD N-terminal domain
|
Resolution | 2.30 |
|
 |
  |   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | P | K | I | T | F | I | G | A | G | S | T | I | F | V | K | N | I | L | G | D | V | F | H | R | E | A | L | K | T | A | H | I | A | L | M | D | I | D | P | T | R | L | E | E | S | H | I | V | V | R | K | L | M | D | S | A | G | A | S | G | K | I | T | C | H | T | Q | Q | K | E | A | L | E | D | A | D | F | V | V |
Query Conservation |   |
  |   |
|
|   |
|
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |
|
|
|
|   |
|
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|   |   |   |
|
|   |
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|   |
|
|
|   |
|   |
|
|   |
| . |
|
|
|   |   |
|   |   |   | . | . | . | . |
|   |   |
|   |   |   |
|   |   |   |   | . | . | . | . | . | . | . | . | . |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |
|   |   |   |   |   | . |
|   |   |   |
|   |
|
|
Template Sequence |   |
H | X | K | I | H | F | V | G | I | G | G | I | G | X | S | . |
A | V | A | L | H | E | F | S | N | . |
. |
. |
. |
G | N | D | V | Y | G | S | N | I | E | E | T | . |
. |
. |
. |
. |
. |
. |
. |
. |
E | R | T | A | Y | L | R | K | L | G | I | P | I | F | V | P | H | S | A | D | N | . |
W | Y | D | P | D | L | V | I |
Template Known Secondary structure |   |
|
|  |  |  |  |  | T | T | T | S |  |  |  |  | . |  |  |  |  |  |  |  |  | T | . | . | . | . | T |
|  |  |  |  |  |
| S | S |
|
| . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  | T | T |
|
|  |  | S | S |
|
| T | T | S | . |
|
|
|
| S |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |
|
|
|  |  | . |  |  |  |  |  |  |  |  |
| . | . | . | . |
|
|  |  |  |  |  |  |
|
|
|
| . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|  |  |  | . |
|
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
0 | . | . | . | . | . | . | . | . | . | 10 | . | . | . | . | |
. | . | . | . | . | 20 | . | . | . | |
|
|
|
. | . | . | . | . | . | 30 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
. | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | |
. | . | . | 60 | . | . | . | . |
  |
  |   |
84 | . | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
Query Sequence |   |
V | A | F | Q | I | G |
Query Conservation |   |
  |
|   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
|   |
Template Sequence |   |
K | T | P | A | V | R |
Template Known Secondary structure |   |
 |
| T | T |
|
|
Template Predicted Secondary structure |   |
 |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
  |   |
65 | . | . | . | . | 70 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|