Return to main results Retrieve Phyre Job Id

Job DescriptionP06720
Confidence96.43%DateThu Jan 5 10:59:23 GMT 2012
Rank240Aligned Residues92
% Identity13%Templatec3pgjB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:shikimate dehydrogenase; PDBTitle: 2.49 angstrom resolution crystal structure of shikimate 5-2 dehydrogenase (aroe) from vibrio cholerae o1 biovar eltor str. n169613 in complex with shikimate
Resolution2.49 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
Predicted Secondary structure 



























Query SS confidence 















































































Query Sequence  SAPKITFIGAGSTIFVKNILGDVFHREALKTAHIALMDIDPTRLEESHIVVRKLMDSAGASGKITCHTQQKEALEDADFV
Query Conservation     

 





          
     
   



 


  

                   
  


   

 




Alig confidence 
























.....












.......















.












Template Conservation    
 







 
 

   
   
.....   
 
 

    .......
  

           .          


Template Sequence  KGATILLIGAGGAARGVLKPLLDQQ. . . . . PASITVTNRTFAK. . . . . . . AEQLAELVAAYGEVKA. QAFEQLKQSYDVI
Template Known Secondary structure  TT


STTT
.....
SSS.......TTS
.GGG

S

S
Template Predicted Secondary structure 






.....



.......






.


Template SS confidence 















































































   122.......130.........140...... ...150......... 160.........170..... ....180........
 
   83......90.........100.......
Predicted Secondary structure 













Query SS confidence 
























Query Sequence  VVAFQIGGYEPCTVTDFEVCKRHGL
Query Conservation 
 
 



    
  

 

 
 
 
Alig confidence 
























Template Conservation 




 
                  
Template Sequence  INSTSASLDGELPAIDPVIFSSRSV
Template Known Secondary structure 
SSTTTTT





GGG

TT
Template Predicted Secondary structure 


















Template SS confidence 
























   189190.........200.........210...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions