Job Description P06720 Confidence 95.90% Date Thu Jan 5 10:59:23 GMT 2012 Rank 269 Aligned Residues 132 % Identity 16% Template c3nv9A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:malic enzyme; PDBTitle: crystal structure of entamoeba histolytica malic enzyme Resolution 2.25 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.					.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.	.
Query SS confidence																																											.	.	.	.
Query Sequence		M	S	A	P	K	I	T	F	I	G	A	G	S	T	I	F	V	K	N	I	L	G	D	V	F	H	R	E	A	L	K	T	A	H	I	A	L	M	D	I	D	.	.	.	.	P	T	R	L	E	E	S	H	I	V	V	R	K	L	M	D	S	A	G	A	S	G	K	I	T	C	H	T	Q	Q	K	E	A	L	E
Query Conservation																																											.	.	.	.
Alig confidence																			.	.	.																						.	.	.	.
Template Conservation																			.	.	.
Template Sequence		I	H	E	C	R	M	V	F	I	G	A	G	S	S	N	T	T	.	.	.	C	L	R	L	I	V	T	A	G	A	D	P	K	K	I	V	M	F	D	S	K	G	S	L	H	N	G	R	E	D	I	K	K	D	T	R	F	Y	R	K	W	E	I	C	E	T	T	N	P	S	K	F	G	S	I	A	E	A	C	V
Template Known Secondary structure		G	G	G									S						.	.	.								T	T			G	G	G						T	T					T	T								G	G	G										S		T	T				S						T
Template Predicted Secondary structure																			.	.	.
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.				.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		D	A	D	F	V	V	V	A	F	Q	I	G	.	G	Y	E	P	C	T	V	T	D	F	E	V	C	K	R	H	G	L	E	Q	T	I	A	D	T	L	G	P	G	G	I	M	R	A	L	R	T	I	P	H	L	W	Q	I	C	E	D	M	T	E	V	C	P	D	A	T	M	L	N	Y	V	N	P	M	A	M	N
Query Conservation														.
Alig confidence														.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.
Template Sequence		G	A	D	V	L	I	S	L	S	T	P	G	P	G	V	V	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	E	W	I	K	S	M	.	.	.	G	E	K	P	I	V	F	C	C	A	N	P	V	P	E	I
Template Known Secondary structure		T		S								S	S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						T	S	.	.	.		S	S								S	S	S		S	S
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.
Template SS confidence
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310																																						.	.	.	.	.	.	.				.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	W	A	M	Y	A	R	Y	P	H	I	K	Q	V	G	L	C	H	S	V	Q
Query Conservation
Alig confidence			.
Template Conservation			.
Template Sequence		Y	.	P	Y	E	A	K	E	A	G	A	Y	I	V	A	T	G	R	G	D	F
Template Known Secondary structure			.							T	T		S					S		T	T	S
Template Predicted Secondary structure			.
Template SS confidence
		334		.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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