Job Description P06720 Confidence 94.04% Date Thu Jan 5 10:59:23 GMT 2012 Rank 364 Aligned Residues 117 % Identity 21% Template c2pi1C_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:d-lactate dehydrogenase; PDBTitle: crystal structure of d-lactate dehydrogenase from aquifex2 aeolicus complexed with nad and lactic acid Resolution 2.12 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	P	K	I	T	F	I	G	A	G	S	T	I	F	V	K	N	I	L	G	D	V	F	H	R	E	A	L	K	T	A	H	I	A	L	M	D	I	D	P	T	R	L	E	E	S	H	I	V	V	R	K	L	M	D	S	A	G	A	S	G	K	I	T	C	H	T	Q	Q	K	E	A	L	E	D	A	D	F	V
Query Conservation
Alig confidence																										.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	R	L	T	L	G	V	I	G	T	G	R	I	G	S	R	V	A	X	Y	G	L	A	F	.	.	.	.	.	.	G	X	K	V	L	C	Y	D	V	V	K	R	E	D	L	K	E	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	C	V	Y	T	S	L	D	E	L	L	K	E	S	D	V	I
Template Known Secondary structure		G	G	S								S													T	.	.	.	.	.	.	T								S	S									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T														S
Template Predicted Secondary structure																										.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.							.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.																.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	A	F	Q	I	G	G	Y	E	P	C	T	V	T	D	F	E	V	C	K	R	H	G	L	E	Q	T	I	A	D	T	L	G	P	G	G	I	M	R	A	L	R	T	I	P	H	L	W	Q	I	C	E	D	M	T	E	V	C	P	D	A	T	M	L	N	Y	V	N	P	M	A	M	N	T	W	A	M	Y	A
Query Conservation
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	L	H	V	P	Y	T	K	E	T	H	H	X	I	N	E	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	I	S	L	X	K	D	G	V	Y	L	I	N	T	A	R	G	K	V	V	D	T	D	A	L	Y	R
Template Known Secondary structure									T	T	T	T	T		B				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					S		T	T							S		G	G	G	B
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.																																					.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Y	P	H	I	K	Q	V	G	L	C	H	S	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	Y	Q	R	G	K	F	S	G	L	G	L	D	V
Template Known Secondary structure					T	T								S
Template Predicted Secondary structure
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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