Job Description P06720 Confidence 93.39% Date Thu Jan 5 10:59:23 GMT 2012 Rank 387 Aligned Residues 75 % Identity 20% Template c2nvuB_ PDB info PDB header:protein turnover, ligase Chain: B: PDB Molecule:maltose binding protein/nedd8-activating enzyme PDBTitle: structure of appbp1-uba3~nedd8-nedd8-mgatp-ubc12(c111a), a2 trapped ubiquitin-like protein activation complex Resolution 2.80 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40																				.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.
Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	S	A	P	K	I	T	F	I	G	A	G	S	T	I	F	V	K	N	I	L	G	D	V	F	H	R	E	A	L	K	T	A	H	I	A	L	M	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	D	P	T	R	L	E	E	S	H	I	V	V	R	K	L	M	D	S	A	G	A
Query Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.												.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.
Template Conservation																	.												.	.	.	.																																												.	.	.	.
Template Sequence		L	D	T	C	K	V	L	V	I	G	A	G	G	L	G	.	C	E	L	L	K	N	L	A	L	S	G	.	.	.	.	F	R	Q	I	H	V	I	D	M	D	T	I	D	V	S	N	L	N	R	Q	F	L	F	R	P	K	D	I	G	R	P	K	A	E	V	A	A	E	F	L	N	D	R	.	.	.	.	V	P
Template Known Secondary structure				T									S	S			.									T	T	T	.	.	.	.											B			G	G	G	G	G	T		T	T			G	G	G	T	T	S	B													.	.	.	.	S	T
Template Predicted Secondary structure																	.												.	.	.	.																																												.	.	.	.
Template SS confidence
		2046	.	.	.	2050	.	.	.	.	.	.	.	.	.	2060		.	.	.	.	.	.	.	.	.	2070	.					.	.	.	.	.	.	.	.	2080	.	.	.	.	.	.	.	.	.	2090	.	.	.	.	.	.	.	.	.	2100	.	.	.	.	.	.	.	.	.	2110	.	.	.	.					.	.
		63	.	.	.	.	.	.	70	.	.						.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.
Query SS confidence												.	.	.	.	.
Query Sequence		S	G	K	I	T	C	H	T	Q	Q	.	.	.	.	.	K	E	A	L	E	D	A	D	F	V	V	V	A
Query Conservation												.	.	.	.	.
Alig confidence												.	.	.	.	.
Template Conservation
Template Sequence		N	C	N	V	V	P	H	F	N	K	I	Q	D	F	N	D	T	F	Y	R	Q	F	H	I	I	V	C	G
Template Known Secondary structure		T								S		G	G	G	S							T		S
Template Predicted Secondary structure
Template SS confidence
		2117	.	.	2120	.	.	.	.	.	.	.	.	.	2130	.	.	.	.	.	.	.	.	.	2140	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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