Job Description P06720 Confidence 84.63% Date Thu Jan 5 10:59:23 GMT 2012 Rank 499 Aligned Residues 72 % Identity 22% Template c2f00A_ PDB info PDB header:ligase Chain: A: PDB Molecule:udp-n-acetylmuramate--l-alanine ligase; PDBTitle: escherichia coli murc Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	P	K	I	T	F	I	G	A	G	S	T	I	F	V	K	N	I	L	G	D	V	F	H	R	E	A	L	K	T	A	H	I	A	L	M	D	I	D	P	T	R	L	E	E	S	H	I	V	V	R	K	L	M	D	S	A	G	A	S	G	K	I	T	C	H	T	Q	Q	K	E	A	L	E	D	A	D	F	V
Query Conservation
Alig confidence																				.								.	.	.	.													.	.	.	.	.	.	.	.	.																						.
Template Conservation																				.								.	.	.	.													.	.	.	.	.	.	.	.	.																						.
Template Sequence		R	V	R	H	I	H	F	V	G	I	G	G	A	G	X	G	G	I	.	A	E	V	L	A	N	E	.	.	.	.	G	Y	Q	I	S	G	S	D	L	A	P	N	.	.	.	.	.	.	.	.	.	P	V	T	Q	Q	L	X	N	L	G	A	T	I	Y	F	N	H	R	P	E	N	.	V	R	D	A	S	V	V
Template Known Secondary structure		T								T	T	T	S	T	T					.							T	.	.	.	.	T								S	S			.	.	.	.	.	.	.	.	.									T	T					S	S			G	G	G	.	G	T	T		S
Template Predicted Secondary structure																				.								.	.	.	.													.	.	.	.	.	.	.	.	.																						.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.		.	.	.	.	40	.	.					.	.	.	.	.	.	.	50	.	.	.	.										.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.		.	.	.	.	80	.	.
		83	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	A	F	Q	I	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	V	S	S	A	I	S
Template Known Secondary structure					T	T
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions