Job Description P06720 Confidence 92.65% Date Thu Jan 5 10:59:23 GMT 2012 Rank 406 Aligned Residues 114 % Identity 19% Template c2d0iC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:dehydrogenase; PDBTitle: crystal structure ph0520 protein from pyrococcus horikoshii ot3 Resolution 1.95 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	S	A	P	K	I	T	F	I	G	A	G	S	T	I	F	V	K	N	I	L	G	D	V	F	H	R	E	A	L	K	T	A	H	I	A	L	M	D	I	D	P	T	R	L	E	E	S	H	I	V	V	R	K	L	M	D	S	A	G	A	S	G	K	I	T	C	H	T	Q	Q	K	E	A	L	E	D	A	D	F
Query Conservation
Alig confidence																	.	.	.	.	.											.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.											.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	Y	G	K	K	V	G	I	L	G	M	G	A	I	G	.	.	.	.	.	K	A	I	A	R	R	L	I	P	F	.	G	V	K	L	Y	Y	W	S	R	H	R	K	V	N	V	E	K	E	L	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	R	Y	M	D	I	D	E	L	L	E	K	S	D	I
Template Known Secondary structure		S	T	T									S				.	.	.	.	.								G	G	G	.	T								T	T											.	.	.	.	.	.	.	.	.	.	.	.	.	.														S
Template Predicted Secondary structure																	.	.	.	.	.											.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.						.	160	.	.	.	.	.	.	.	.		.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.															.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	V	A	F	Q	I	G	G	Y	E	P	C	T	V	T	D	F	E	V	C	K	R	H	G	L	E	Q	T	I	A	D	T	L	G	P	G	G	I	M	R	A	L	R	T	I	P	H	L	W	Q	I	C	E	D	M	T	E	V	C	P	D	A	T	M	L	N	Y	V	N	P	M	A	M	N	T	W	A	M	Y
Query Conservation
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	I	L	A	L	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	T	R	D	T	Y	H	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	N	E	E	R	V	K	K	L	E	G	K	Y	L	V	N	I	G	R	G	A	L	V	D	E	K	A	V	T
Template Known Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T	T	T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	B								T	T	T							S		G	G	G	B
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		204	.	.	.	.	.																							210	.	.	.	.	.	.	.																.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		162	.			.	.	.	.	.	.	170	.	.
Predicted Secondary structure				.	.
Query SS confidence				.	.
Query Sequence		A	R	.	.	Y	P	H	I	K	Q	V	G	L
Query Conservation				.	.
Alig confidence				.	.
Template Conservation
Template Sequence		E	A	I	K	Q	G	K	L	K	G	Y	A	T
Template Known Secondary structure						T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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