Job Description P06720 Confidence 98.33% Date Thu Jan 5 10:59:23 GMT 2012 Rank 125 Aligned Residues 116 % Identity 24% Template c1zejA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:3-hydroxyacyl-coa dehydrogenase; PDBTitle: crystal structure of the 3-hydroxyacyl-coa dehydrogenase (hbd-9,2 af2017) from archaeoglobus fulgidus dsm 4304 at 2.00 a resolution Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	P	K	I	T	F	I	G	A	G	S	T	I	F	V	K	N	I	L	G	D	V	F	H	R	E	A	L	K	T	A	H	I	A	L	M	D	I	D	P	T	R	L	E	E	S	H	I	V	V	R	K	L	M	D	S	A	G	A	S	G	K	I	T	C	H	T	Q	Q	K	E	A	L	E	D	A	D	F	V	V
Query Conservation
Alig confidence																								.	.	.	.	.	.	.																												.	.	.	.	.									.
Template Conservation																								.	.	.	.	.	.	.																												.	.	.	.	.									.
Template Sequence		H	X	K	V	F	V	I	G	A	G	L	X	G	R	G	I	A	I	A	I	A	S	.	.	.	.	.	.	.	K	H	E	V	V	L	Q	D	V	S	E	K	A	L	E	A	A	R	E	Q	I	P	E	E	L	L	S	.	.	.	.	.	K	I	E	F	T	T	T	L	.	E	K	V	K	D	C	D	I	V	X
Template Known Secondary structure											S												T	.	.	.	.	.	.	.	T	S							S												S		G	G	G	G	G	.	.	.	.	.	G					S	S		.	T	T	G	G	G		S
Template Predicted Secondary structure																								.	.	.	.	.	.	.																												.	.	.	.	.									.
Template SS confidence
		0	.	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.								.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.						.	50	.	.	.	.	.	.		.	.	.	60	.	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	F	Q	I	G	G	Y	E	P	C	T	V	T	D	F	E	V	C	K	R	H	G	L	E	Q	T	I	A	D	T	L	G	P	G	G	I	M	R	A	L	R	T	I	P	H	L	W	Q	I	C	E	D	M	T	E	V	C	P	D	A	T	M	L	N	Y	V	N	P	M	A	M	N	T	W	A	M	Y	A	R
Query Conservation
Alig confidence						.	.	.	.		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.					.	.
Template Conservation						.	.	.	.		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.					.	.
Template Sequence		E	A	V	F	.	.	.	.	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	L	N	T	K	V	E	V	L	R	E	V	E	R	L	T	.	N	A	P	L	.	.	C	S	N	T	S	V	I	S	V	D	D	I	A	E	R
Template Known Secondary structure						.	.	.	.	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														T	T		.		S			.	.					S	S	S							T	T
Template Predicted Secondary structure						.	.	.	.		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.					.	.
Template SS confidence
		67	.	.	70					.																																		.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.		.	.	90	.			.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		164	.		.	.	.	.	170	.	.
Predicted Secondary structure				.
Query SS confidence				.
Query Sequence		Y	P	.	H	I	K	Q	V	G	L
Query Conservation				.
Alig confidence				.
Template Conservation
Template Sequence		L	D	S	P	S	R	F	L	G	V
Template Known Secondary structure		S	S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		107	.	.	110	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions