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Job DescriptionP06720
Confidence100.00%DateThu Jan 5 10:59:23 GMT 2012
Rank11Aligned Residues315
% Identity15%Templatec1pzfD_
PDB info PDB header:oxidoreductaseChain: D: PDB Molecule:lactate dehydrogenase; PDBTitle: t.gondii ldh1 ternary complex with apad+ and oxalate
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
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Query Sequence  MMSAPKITFIGAGSTIFVKNILGDVFHREALKTAHIALMDIDPTRLEESHIVVRKLMDSAGASGKITCHTQQKEALEDAD
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Template Sequence  VQRRKKVAMIGSGMIGGTMGYLCALR. . . . . ELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALTGAD
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   17..20.........30.........40.. .......50.........60.........70.........80.........90.
 
   81........90.........100.........110.........120.........130.........140.........150.........160
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Query Sequence  FVVVAFQIGGYEPCTVTDFEVCKRHGLEQTIADTLGPGGIMRALRTIPHLWQICEDMTEVCPDATMLNYVNPMAMNTWAM
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Template Sequence  CVIVTAGLTKVP. . . . . . . . . . . . . . . . . . GKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVTNPLDCMVKVM
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   93......100.... .....110.........120.........130.........140.........150....
 
   161.. ......170.... .....180.........190.........200.........210.........220.........230......
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Query Sequence  YAR. . YPHIKQVGLCH. . SVQGTAEELARDLNIDPATLRYRCAGINHMAFYLELERKTADGSYVNLYPELLAAYEAGQAP
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Template Sequence  CEASGVPTNMICGMACMLDSGRFRRYVADALSVSPRDVQATVIG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . THGDCM
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   150.........160.........170.........180.........190... ......
 
   237..240.........250.........260.........270.........280.........290.........300.........310... .
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Query Sequence  KPNIHGNTRCQNIVRYEMFKKLGYFVTESSEHFAEYTPWFIKPGREDLIERYKVPLDEYPKRCVEQLANWHKELEEY. . K
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Template Sequence  VPLVRYITVNGYPIQ. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . KFIKDGVVTEKQLEEIAEHTKVSGGEIVRF
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   200.........210.... .....220.........230.........240....
 
   315....320.........330.........340.........350.........360.........370.........380.........390....
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Query Sequence  KASRIDIKPSREYASTIMNAIWTGEPSVIYGNVRNDGLIDNLPQGCCVEVACLVDANGIQPTKVGTLPSHLAALMQTNIN
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Template Sequence  LGQGSAYYAPAASAVAMATSFLNDEKRVIPCSVYCNGEYG. . LKDMFIGLPAVIGGAGIERVIELELNEEEKKQFQKSVD
Template Known Secondary structure  SSS


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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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