Job Description P06720 Confidence 100.00% Date Thu Jan 5 10:59:23 GMT 2012 Rank 6 Aligned Residues 429 % Identity 22% Template c1obbB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:alpha-glucosidase; PDBTitle: alpha-glucosidase a, agla, from thermotoga maritima in2 complex with maltose and nad+ Resolution 1.90 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	K	I	T	F	I	G	A	G	S	T	I	F	V	K	N	I	L	G	D	V	F	H	R	E	A	L	K	T	A	H	I	A	L	M	D	I	D	P	T	R	L	E	E	S	H	I	V	V	R	K	L	M	D	S	A	G	A	S	G	K	I	T	C	H	T	Q	Q	K	E	A	L	E	D	A	D	F	V	V	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	K	I	G	I	I	G	A	G	S	A	V	F	S	L	R	L	V	S	D	L	C	K	T	P	G	L	S	G	S	T	V	T	L	M	D	I	D	E	E	R	L	D	A	I	L	T	I	A	K	K	Y	V	E	E	V	G	A	D	L	K	F	E	K	T	M	N	L	D	D	V	I	I	D	A	D	F	V	I	N
Template Known Secondary structure								T	T	T														T		G	G	G	T	T								S																				T									S							T	T		S
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.			110	.	.	.	.	.			.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																											.	.							.	.
Query SS confidence																											.	.							.	.
Query Sequence		A	F	Q	I	G	G	Y	E	P	C	T	V	T	D	F	E	V	C	K	R	H	G	L	E	Q	.	.	T	I	A	D	T	L	.	.	G	P	G	G	I	M	R	A	L	R	T	I	P	H	L	W	Q	I	C	E	D	M	T	E	V	C	P	D	A	T	M	L	N	Y	V	N	P	M	A	M	N	T	W	A	M
Query Conservation																											.	.							.	.
Alig confidence										.																	.	.							.	.
Template Conservation										.
Template Sequence		T	A	M	V	G	G	H	T	.	Y	L	E	K	V	R	Q	I	G	E	K	Y	G	Y	Y	R	G	I	D	A	Q	E	F	N	M	V	S	D	Y	Y	T	F	S	N	Y	N	Q	L	K	Y	F	V	D	I	A	R	K	I	E	K	L	S	P	K	A	W	Y	L	Q	A	A	N	P	I	F	E	G	T	T	L	V
Template Known Secondary structure					T	T				.												T	T		T	T		T	T		B	T	T	B			T	T			S	S	S																				T	T	S						S	S
Template Predicted Secondary structure										.
Template SS confidence
		84	.	.	.	.	.	90	.		.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	A	R	Y	P	H	I	K	Q	V	G	L	C	H	S	V	Q	G	T	A	E	E	L	A	R	D	L	N	I	D	P	A	T	L	R	Y	R	C	A	G	I	N	H	M	A	F	Y	L	E	L	E	R	K	T	A	D	G	S	Y	V	N	L	Y	P	E	L	L	A	A	Y	E	A	G	Q	A	P	K	P	N	I
Query Conservation
Alig confidence							.															.	.																																			.	.	.	.	.
Template Conservation							.															.	.																																			.	.	.	.	.
Template Sequence		T	R	T	V	P	.	I	K	A	V	G	F	H	G	H	Y	G	V	M	E	.	.	I	V	E	K	L	G	L	E	E	E	K	V	D	W	Q	V	A	G	V	N	H	G	I	W	L	N	R	F	R	Y	N	G	G	N	.	.	.	.	.	A	Y	P	L	L	D	K	W	I	E	E	K	S	K	D	W	K	P	E
Template Known Secondary structure					S		.	S							G	G	G					.	.						T			G	G	G									T	T										T	T			.	.	.	.	.													G	G	G				S
Template Predicted Secondary structure							.															.	.																																			.	.	.	.	.
Template SS confidence
		163	.	.	.	.		.	.	170	.	.	.	.	.	.	.	.	.	180	.			.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.						.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.										.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.
Query Sequence		H	G	N	T	R	C	Q	N	I	V	R	Y	E	M	F	K	K	L	G	Y	F	V	T	E	S	S	E	H	F	A	E	Y	.	.	.	.	.	.	.	.	.	T	P	W	F	I	K	P	G	R	E	D	L	I	E	R	Y	K	V	P	L	D	E	Y	P	K	R	C	V	E	Q	L	A	N	W	H	K	E	L	E
Query Conservation																																		.	.	.	.	.	.	.	.	.
Alig confidence																																		.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	P	F	N	D	Q	L	S	P	A	A	I	D	M	Y	R	F	Y	G	V	M	P	I	G	D	T	V	R	N	S	S	W	R	Y	H	R	D	L	E	T	K	K	K	W	Y	G	E	P	W	G	G	A	D	S	E	I	G	W	K	W	Y	Q	D	T	L	G	K	V	T	E	I	T	K	K	V	A	K	F	I	K
Template Known Secondary structure		S	T	T			T	T	S											S	S				G	G	G	G	T				G	G	G	G	S	S										T	T	T		S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
		312	.	.	.	.	.	.	.	320																									.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	Y	K	K	A	S	R	I	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	K	P	S	R	E	Y	A	S	T	I	M	N	A	I	W	T	G	E	P	S	V	I	Y	G	N	V	R	N	D	G	L	I	D	N	L	P	Q	G	C	C	V	E	V	A	C	L
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	N	P	S	V	R	L	S	D	L	G	S	V	L	G	K	D	L	S	E	K	Q	F	V	L	E	V	E	K	I	L	D	P	E	R	K	S	G	E	Q	H	I	P	F	I	D	A	L	L	N	D	N	K	A	R	F	V	V	N	I	P	N	K	G	I	I	H	G	I	D	D	D	V	V	V	E	V	P	A	L
Template Known Secondary structure			S	T	T	S		G	G	G	G	G	G	G	S	T	T																S		S	S					S																							T	T	S	S	T	T	S		T	T	S
Template Predicted Secondary structure
Template SS confidence
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.
		368	.	370	.	.	.	.	.	.	.	.	.		380	.	.	.	.	.		.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.							.
Predicted Secondary structure														.							.																																																						.	.	.	.	.	.
Query SS confidence														.							.																																																						.	.	.	.	.	.
Query Sequence		V	D	A	N	G	I	Q	P	T	K	V	G	.	T	L	P	S	H	L	.	A	A	L	M	Q	T	N	I	N	V	Q	T	L	L	T	E	A	I	L	T	E	N	R	D	R	V	Y	H	A	A	M	M	D	P	H	T	A	A	V	L	G	I	D	E	I	Y	A	L	V	D	D	L	I	.	.	.	.	.	.	A
Query Conservation														.							.																																																						.	.	.	.	.	.
Alig confidence														.							.																																								.	.	.												.	.	.	.	.	.
Template Conservation																																																													.	.	.
Template Sequence		V	D	K	N	G	I	H	P	E	K	I	E	P	P	L	P	D	R	V	V	K	Y	Y	L	R	P	R	I	M	R	M	E	M	A	L	E	A	F	L	T	G	D	I	R	I	I	K	E	L	L	Y	R	D	P	R	T	K	S	D	.	.	.	E	Q	V	E	K	V	I	E	E	I	L	A	L	P	E	N	E	E
Template Known Secondary structure				T	T								S	S										T																														S	T	T					.	.	.												T	S	G	G	G
Template Predicted Secondary structure																																																													.	.	.
Template SS confidence
		396	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.				.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.
		440	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	H	G	D	W	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	R	K	H	Y	L
Template Known Secondary structure						T
Template Predicted Secondary structure
Template SS confidence
		473	.	.	.	.	.