Job Description P06720 Confidence 95.43% Date Thu Jan 5 10:59:23 GMT 2012 Rank 304 Aligned Residues 127 % Identity 18% Template c1o0sB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:nad-dependent malic enzyme; PDBTitle: crystal structure of ascaris suum malic enzyme complexed with nadh Resolution 2.00 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.							.	.	.	.	40	.	.					.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure																																				.	.	.	.	.	.								.	.	.	.
Query SS confidence																																				.	.	.	.	.	.								.	.	.	.
Query Sequence		M	S	A	P	K	I	T	F	I	G	A	G	S	T	I	F	V	K	N	I	L	G	D	V	F	H	R	E	A	L	K	T	A	H	.	.	.	.	.	.	I	A	L	M	D	I	D	.	.	.	.	P	T	R	L	E	E	S	H	I	V	V	R	K	L	M	D	S	A	G	A	S	G	K	I	T	C	H	T	Q
Query Conservation																																				.	.	.	.	.	.								.	.	.	.
Alig confidence																															.					.	.	.	.	.	.								.	.	.	.				.	.	.	.	.																.	.
Template Conservation																															.																									.	.	.	.	.																.	.
Template Sequence		V	S	Q	E	K	Y	L	F	F	G	A	G	A	A	S	T	G	I	A	E	M	I	V	H	Q	M	Q	N	E	.	G	I	S	K	E	E	A	C	N	R	I	Y	L	M	D	I	D	G	L	V	T	K	N	R	.	.	.	.	.	K	E	M	N	P	R	H	V	Q	F	A	K	D	M	P	.	.	E	T	T	S
Template Known Secondary structure		G	G	G									S																T	T	.	T									T						T	T				B	S	S		.	.	.	.	.	S	S			T	T	T	T	T	T		B	S	S		.	.
Template Predicted Secondary structure																															.																									.	.	.	.	.																.	.
Template SS confidence
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.		.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370						.	.	.	.	.	.	.	.	.	380	.	.	.	.	.			.	.	.	.
		72	.	.	.	.	.	.	.			80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure										.	.
Query SS confidence										.	.
Query Sequence		Q	K	E	A	L	E	D	A	.	.	D	F	V	V	V	A	F	Q	I	G	G	Y	E	P	C	T	V	T	D	F	E	V	C	K	R	H	G	L	E	Q	T	I	A	D	T	L	G	P	G	G	I	M	R	A	L	R	T	I	P	H	L	W	Q	I	C	E	D	M	T	E	V	C	P	D	A	T	M	L	N	Y
Query Conservation										.	.
Alig confidence										.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	L	E	V	I	R	A	A	R	P	G	A	L	I	G	A	S	T	V	R	G	A	F	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	E	V	I	R	A	M	A	E	I	N	E	R	P	I	I	F	A	L
Template Known Secondary structure												S						S	S		T	T		S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												S	S
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.																																						.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.
		150	.	.				.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure					.	.	.
Query SS confidence					.	.	.
Query Sequence		V	N	P	.	.	.	M	A	M	N	T	W	A	M	Y	A	R	Y	P	H	I	K	Q	V	G	L	C
Query Conservation					.	.	.
Alig confidence					.	.	.
Template Conservation
Template Sequence		S	N	P	T	S	K	A	E	C	T	A	E	E	A	Y	T	F	T	N	G	A	A	L	Y	A	S	G
Template Known Secondary structure			S	S	G	G	G		S	S								T	T	T	S							S
Template Predicted Secondary structure
Template SS confidence
		433	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions