Job Description P06720 Confidence 94.62% Date Thu Jan 5 10:59:23 GMT 2012 Rank 339 Aligned Residues 116 % Identity 19% Template c1j4aA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:d-lactate dehydrogenase; PDBTitle: insights into domain closure, substrate specificity and2 catalysis of d-lactate dehydrogenase from lactobacillus3 bulgaricus Resolution 1.90 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	M	S	A	P	K	I	T	F	I	G	A	G	S	T	I	F	V	K	N	I	L	G	D	V	F	H	R	E	A	L	K	T	A	H	I	A	L	M	D	I	D	P	T	R	L	E	E	S	H	I	V	V	R	K	L	M	D	S	A	G	A	S	G	K	I	T	C	H	T	Q	Q	K	E	A	L	E	D	A	D
Query Conservation
Alig confidence																												.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	V	R	D	Q	V	V	G	V	V	G	T	G	H	I	G	Q	V	F	M	Q	I	M	E	G	F	.	.	.	.	.	.	G	A	K	V	I	T	Y	D	I	F	R	N	P	E	L	E	K	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	Y	Y	V	D	S	L	D	D	L	Y	K	Q	A	D
Template Known Secondary structure			G	G	G	S								S													T	.	.	.	.	.	.	T								S	S								T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T		B		S										S
Template Predicted Secondary structure																												.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.							.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.																.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		F	V	V	V	A	F	Q	I	G	G	Y	E	P	C	T	V	T	D	F	E	V	C	K	R	H	G	L	E	Q	T	I	A	D	T	L	G	P	G	G	I	M	R	A	L	R	T	I	P	H	L	W	Q	I	C	E	D	M	T	E	V	C	P	D	A	T	M	L	N	Y	V	N	P	M	A	M	N	T	W	A	M
Query Conservation
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	I	S	L	H	V	P	D	V	P	A	N	V	H	M	I	N	D	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	I	A	K	M	K	Q	D	V	V	I	V	N	V	S	R	G	P	L	V	D	T	D	A	V
Template Known Secondary structure							S				G	G	G	T	T		B	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					S		T	T							S		G	G	G	B
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220																																					.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	A	R	Y	P	H	I	K	Q	V	G	L	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	R	G	L	D	S	G	K	I	F	G	Y	A
Template Known Secondary structure								T	S
Template Predicted Secondary structure
Template SS confidence
		246	.	.	.	250	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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