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Job DescriptionP23886
Confidence99.96%DateThu Jan 5 11:40:21 GMT 2012
Rank60Aligned Residues318
% Identity16%Templated3b60a2
SCOP infoABC transporter transmembrane region ABC transporter transmembrane region ABC transporter transmembrane region
Resolution3.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  RALLPYLALYKRHKWMLSLGIVLAIVTLLASIGLLTLSGWFLSASAVAGVAGLYSFNYMLPAAGVRGAAITRTAGRYFER
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Template Sequence  QTFRRLWPTIAPFKAGLIVAGIALILNAASDTFMLSLLKPLLDDGFGKTDRS. . . . VLLWMPLVVIGLMILRGITSYISS
Template Known Secondary structure  GGGTSSTTSTT....S
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   11........20.........30.........40.........50.........60.. .......70.........80......
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  LVSHDATFRVLQHLRIYTFSKLLPLSPAGLARYRQGELLNRVVADVDTLDHLYLRVISPLVGAFVVIMVVTIGLSFLDFT
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Template Sequence  YCISWVSGKVVMTMRRRLFGHMMGMPVAFFDKQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQ
Template Known Secondary structure  T

STS
TTT
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   87..90.........100.........110.........120.........130.........140.........150.........160......
 
   162.......170.........180.........190.........200.........210.........220.........230.........240.
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Query Sequence  LAFTLGGIMLLTLFLMPPLFYRAGKSTGQNLTHLRGQYRQQLTAWLQGQAELTIFGASDRYRTQLENTEIQWLEAQRRQS
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Template Sequence  LSIILVVLAPI. VSIAIRVVSKRFRSISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNKMRLQGMKMV
Template Known Secondary structure  T.TT
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   167..170....... ..180.........190.........200.........210.........220.........230.........240.....
 
   242.......250.........260.........270.........280.........290.........300.........310.........320.
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Query Sequence  ELTALSQAIMLLIGALAVILMLWMASGGVGGNAQPGALIALFVFCALAAFEALAPVTGAFQHLGQVIASAVRISDLTDQK
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Template Sequence  SASSISDPIIQLIASLALAFVLYAASFPSVMDSLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDSE
Template Known Secondary structure  SSSTTSSSS
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   246...250.........260.........270.........280.........290.........300.........310.........320.....
 
   322..
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Query Sequence  PEV
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Template Sequence  QEK
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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