Job Description P23886 Confidence 99.70% Date Thu Jan 5 11:40:21 GMT 2012 Rank 64 Aligned Residues 274 % Identity 12% Template d1pf4a2 SCOP info ABC transporter transmembrane region ABC transporter transmembrane region ABC transporter transmembrane region Resolution 3.80

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	L	L	P	Y	L	A	L	Y	K	R	H	K	W	M	L	S	L	G	I	V	L	A	I	V	T	L	L	A	S	I	G	L	L	T	L	S	G	W	F	L	S	A	S	A	V	A	G	V	A	G	L	Y	S	F	N	Y	M	L	P	A	A	G	V	R	G	A	A	I	T	R	T	A	G	R	Y	F	E	R
Query Conservation
Alig confidence																																																						.	.	.	.
Template Conservation																																																						.	.	.	.
Template Sequence		Q	T	F	K	R	L	W	T	Y	I	R	L	Y	K	A	G	L	V	V	S	T	I	A	L	V	I	N	A	A	A	D	T	Y	M	I	S	L	L	K	P	L	L	D	E	G	F	G	N	A	E	S	N	.	.	.	.	F	L	R	I	L	P	F	M	I	L	G	L	M	F	V	R	G	L	S	G	F	A	S	S
Template Known Secondary structure			S	T	T							T	S		S	S																											T	T	S	S		S					S	.	.	.	.
Template Predicted Secondary structure																																																						.	.	.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.					.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	S	H	D	A	T	F	R	V	L	Q	H	L	R	I	Y	T	F	S	K	L	L	P	L	S	P	A	G	L	A	R	Y	R	Q	G	E	L	L	N	R	V	V	A	D	V	D	T	L	D	H	L	Y	L	R	V	I	S	P	L	V	G	A	F	V	V	I	M	V	V	T	I	G	L	S	F	L	D	F	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	C	L	S	W	V	S	G	N	V	V	M	Q	M	R	R	R	L	F	N	H	F	M	H	M	P	V	R	F	F	D	Q	E	S	T	G	G	L	L	S	R	I	T	Y	D	S	E	Q	V	A	G	A	T	S	R	A	L	V	S	I	V	R	E	G	A	S	I	I	G	L	L	T	L	M	F	W	N	S	W	Q
Template Known Secondary structure					T	T	T	G	G	G											T	T	T		S	S								T	T											G	G	G																T	T					G	G	G	G	G	G	S				S
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	F	T	L	G	G	I	M	L	L	T	L	F	L	M	P	P	L	F	Y	R	A	G	K	S	T	G	Q	N	L	T	H	L	R	G	Q	Y	R	Q	Q	L	T	A	W	L	Q	G	Q	A	E	L	T	I	F	G	A	S	D	R	Y	R	T	Q	L	E	N	T	E	I	Q	W	L	E	A	Q	R	R	Q	S
Query Conservation
Alig confidence													.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	S	L	V	L	I	V	V	A	P	V	.	V	A	F	A	I	S	F	V	S	K	R	F	R	K	I	S	R	N	M	Q	T	A	M	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	R	Q	Q	T	M	K	L	V
Template Known Secondary structure		T					G	G	G				.					T	T	G	G	G	G												T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure													.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.		.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.																																				.	.	.	.	.	.	.	.	210
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	T	A	L	S	Q	A	I	M	L	L	I	G	A	L	A	V	I	L	M	L	W	M	A	S	G	G	V	G	G	N	A	Q	P	G	A	L	I	A	L	F	V	F	C	A	L	A	A	F	E	A	L	A	P	V	T	G	A	F	Q	H	L	G	Q	V	I	A	S	A	V	R	I	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	A	Q	S	I	A	D	P	V	I	Q	M	I	A	S	L	A	L	F	A	V	L	F	L	A	S	V	D	S	I	R	A	E	L	T	P	G	T	F	T	V	V	F	S	A	M	F	G	L	M	R	P	L	K	A	L	T	S	V	T	S	E	F	Q	R	G	M	A	A	C	Q	T	L	F
Template Known Secondary structure			G	G	G	G										T	T							G	G	G	G	T	S	S															G	G	G	G	G	G	T	T	T	T	T	G	G	G	G	G	S	S							T
Template Predicted Secondary structure
Template SS confidence
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions