Return to main results Retrieve Phyre Job Id

Job DescriptionP23886
Confidence100.00%DateThu Jan 5 11:40:21 GMT 2012
Rank52Aligned Residues216
% Identity26%Templated1l7vc_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases ABC transporter ATPase domain-like
Resolution3.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   339340.........350.........360.........370.........380.........390.........400.........410........
Predicted Secondary structure 







































Query SS confidence 















































































Query Sequence  LTLRDVQFTYPEQSQQALKGISLQVNAGEHIAILGRTGCGKSTLLQQLTRAWDPQQGEILLNDSPIASLNEAALRQTISV
Query Conservation 
   

 
 
      

  


 
  
    


 








  
 
      
 
   
  
           
  
Alig confidence 









......



































.


























Template Conservation 
   

    ...... 
  

  
  

   


 








  
 
  .   
 
                     
Template Sequence  XQLQDVAEST. . . . . . RLGPLSGEVRAGEILHLVGPNGAGKSTLLARXAGXT. SGKGSIQFAGQPLEAWSATKLALHRAY
Template Known Secondary structure 

TT......TS
STT

B

TTSSTS
.

SSSSSBGGGS
Template Predicted Secondary structure 

......















.















Template SS confidence 















































































   5....10.... .....20.........30.........40.........50 .........60.........70.......
 
   419420.... .....430.........440.........450.........460.........470.........480.........490.
Predicted Secondary structure 





.



























......
Query SS confidence 





.


































































. . . . . .
Query Sequence  VPQRVH. LFSATLRDNLLLASPGSSDEALSEILRRVGLEKLLEDAGLNSWLGEGGRQLSGGELRRLAIARALLH. . . . . .
Query Conservation 
 
   .

  

 


                    
   
   
  
 
   
  




 


 




  ......
Alig confidence 





.























........


































......
Template Conservation                                 ........                  

 
       
 
         
Template Sequence  LSQQQTPPFATPVWHYLTLHQHDKTRTELLN. . . . . . . . DVAGALALDDKLGRSTNQLSGGEWQRVRLAAVVLQITPQAN
Template Known Secondary structure 
S




SS
B
S
TT
........TT
TTTTTSBGGG


TTT
Template Predicted Secondary structure 

















........
























Template SS confidence 















































































   78.80.........90.........100........ .110.........120.........130.........140.........
 
   492.......500.........510.........520.. .......530...... ...540.........550.........560........
Predicted Secondary structure  .










.



.









Query SS confidence  .






























.













.































Query Sequence  . DAPLVLLDEPTEGLDATTESQILELLAEMMR. EKTVLMVTHRLRGL. SRFQQIIVMDNGQIIEQGTHAELLARQGRYYQ
Query Conservation  .   





 

 

      
   
     .  


 


     .   
 
  
  
 
   
    
      
  
Alig confidence  .






























.













.

























.




Template Conservation    
 






   

      
   
  
     


 


    
    
 
 

  
 
   
    
   .     
Template Sequence  PAGQLLLLDEPXNSLDVAQQSALDKILSALCQQGLAIVXSSHDLNHTLRHAHRAWLLKGGKXLASGRREEVLTP. PNLAQ
Template Known Secondary structure  TT

SS
STT

TT





SB

BTT


SBS
.
Template Predicted Secondary structure 






















.
Template SS confidence 















































































   150.........160.........170.........180.........190.........200.........210.........220... .....
 
   569570
Predicted Secondary structure 
Query SS confidence 

Query Sequence  FK
Query Conservation 
 
Alig confidence 

Template Conservation    
Template Sequence  AY
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 

   229230
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions