Return to main results Retrieve Phyre Job Id

Job DescriptionP23886
Confidence99.67%DateThu Jan 5 11:40:21 GMT 2012
Rank65Aligned Residues170
% Identity13%Templatec3tauB_
PDB info PDB header:transferaseChain: B: PDB Molecule:guanylate kinase; PDBTitle: crystal structure of a putative guanylate monophosphaste kinase from2 listeria monocytogenes egd-e
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   365....370.........380.........390.........400.........410.........420.........430.........440....
Predicted Secondary structure 











































Query SS confidence 















































































Query Sequence  AGEHIAILGRTGCGKSTLLQQLTRAWDPQQGEILLNDSPIASLNEAALRQTISVVPQRVHLFSATLRDNLLLASPGSSDE
Query Conservation   
    


 








  
 
      
 
   
  
           
  
 
   

  

 


          
Alig confidence 

























.


















..





























..
Template Conservation 

 

 
 
 







   
    .          
        ..             
                ..
Template Sequence  RGLLIVLSGPSGVGKGTVREAVFKDP. ETSFDYSISXTTRLPREGE. . QDGVDYYFRSREVFEQAIKDGKXLEYAEYV. .
Template Known Secondary structure 



STTSSST.T





SS


TT
..
BTTTB

TT
T..
Template Predicted Secondary structure 








.









..









..
Template SS confidence 















































































   4.....10.........20......... 30.........40........ .50.........60.........70........
 
   445....450.........460.........470.........480.........490.........500.........510.........520....
Predicted Secondary structure 






























Query SS confidence 















































































Query Sequence  ALSEILRRVGLEKLLEDAGLNSWLGEGGRQLSGGELRRLAIARALLHDAPLVLLDEPTEGLDATTESQILELLAEMMREK
Query Conservation            
   
   
  
 
   
  




 


 




     





 

 

      
   
       
Alig confidence  .........


































































..

Template Conservation  .........          
          
  
                 
 



             

    ..  
Template Sequence  . . . . . . . . . GNYYGTPLEYVEEKLAAGVDIFLEIEVQGAXQVRKAXPEGIFIFLTPPDLSEEERXETAKKEIEXXA. . SY
Template Known Secondary structure  .........TTT




TTS
GGGT

T..TS
Template Predicted Secondary structure  .........


















..

Template SS confidence 















































































   7980.........90.........100.........110.........120.........130.........140..... ..
 
   525....530...... ...540.........550
Predicted Secondary structure 

.



Query SS confidence 











.













Query Sequence  TVLMVTHRLRGL. SRFQQIIVMDNGQI
Query Conservation 


 


     .   
 
  
  
 
Alig confidence 











.













Template Conservation     

  

  
      

  
  
 
Template Sequence  DYAVVNDVVANAVQKIKGIVETEHLKT
Template Known Secondary structure  S
SST
Template Predicted Secondary structure 





Template SS confidence 


























   164.....170.........180.........190
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions