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Job DescriptionP23886
Confidence97.45%DateThu Jan 5 11:40:21 GMT 2012
Rank98Aligned Residues111
% Identity26%Templatec3pxiB_
PDB info PDB header:protein bindingChain: B: PDB Molecule:negative regulator of genetic competence clpc/mecb; PDBTitle: structure of meca108:clpc
Resolution6.93 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   364.....370.........380.........390.........400.........410.........420.........430.........440...
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Query Sequence  NAGEHIAILGRTGCGKSTLLQQLTRAWDPQQGEILLNDSPIASLNEAALRQTISVVPQRVHLFSATLRDNLLLASPGSSD
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Template Sequence  RPIGSFIFLGPTGVGKTELARALAESIFGDEESMI. . RIDMSE. . . . . . . . . . . YMEKHSTS. . . . . . . . . . . . . . . . . .
Template Known Secondary structure  S
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TTSSS
TT
..GGG...........G
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   536...540.........550.........560.........570 ...... ...580....
 
   444.....450.........460.........470.........480.........490... ......500.........510.........
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Query Sequence  EALSEILRRVGLEKLLEDAGLNSWLGEGGRQLSGGELRRLAIARALLHDA. PLVLLDEPTEGLDATTESQILELLAE. . .
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . LTEKVRRKPYSVVLLDAIEKA. HPDVFNILLQVLEDGRL
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SSS
GGGS.
SB
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   602.......610.........620.. .......630.........
 
   520.........530. ........540.......
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Query Sequence  . . . MMREKTVLMVTH. . . . . . . . . . . . . . . . . RLRGLSRFQQIIVMDN
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Template Sequence  TTVDFRNTILIMTSNVGASEKDKVMGELKRAFRPEFINRIDEIIVFHE
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B
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S
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   640.........650.........660.........670.........680.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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