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Job DescriptionP23886
Confidence95.84%DateThu Jan 5 11:40:21 GMT 2012
Rank192Aligned Residues120
% Identity29%Templatec3hu2C_
PDB info PDB header:transport proteinChain: C: PDB Molecule:transitional endoplasmic reticulum atpase; PDBTitle: structure of p97 n-d1 r86a mutant in complex with atpgs
Resolution2.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  SLQVNAGEHIAILGRTGCGKSTLLQQLTRAWDPQQGEILLNDSPIASLNEAALRQTISVVPQRVHLFSATLRDNLLLASP
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Template Sequence  AIGVKPPRGILLYGPPGTGKTLIARAVANETGAF. . FFLINGPEIMS. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  T





STTSS
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Query Sequence  GSSDEALSEILRRVGLEKLLEDAGLNSWLGEGGRQLSGGELRRLAIARALLHDAPLVLLDEPTE. . . . . . GLDATTESQI
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . KLAG. . . . . . ESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRI
Template Known Secondary structure  ..........................S
TT......SSSSGGGT
B
SSS


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   277..280 .........290.........300.........310.........320....
 
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Query Sequence  LELLAEMM. . . . . . REKTVLMVTHRLRGL. . . . . . . SRFQQIIVMD
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Template Sequence  VSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIG
Template Known Secondary structure  S
GGG

S
GGGB
GGGGSTTSS


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   325....330.........340.........350.........360.........370
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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