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Job DescriptionP23886
Confidence100.00%DateThu Jan 5 11:40:21 GMT 2012
Rank57Aligned Residues220
% Identity25%Templatec3bk7A_
PDB info PDB header:hydrolyase/translationChain: A: PDB Molecule:abc transporter atp-binding protein; PDBTitle: structure of the complete abce1/rnaase-l inhibitor protein2 from pyrococcus abysii
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   319320.........330.........340.........350.........360.........370.........380.........390........
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Query Sequence  DQKPEVTFPDTQTRVADRVSLTLRDVQFTYPEQSQQALKGISLQVNAGEHIAILGRTGCGKSTLLQQLTRAWDPQQGEIL
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Template Sequence  PYEIRFTKLSERVDVERETLVEYPRLVKDYGS. . . FKLEVEPGEIRKGEVIGIVGPNGIGKTTFVKMLAGVEEPTEGKVE
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   324.....330.........340.........350..... ....360.........370.........380.........390.........400
 
   399400.........410.........420.. .......430.........440.........450.........460.........470.......
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Query Sequence  LNDSPIASLNEAALRQTISVVPQR. VHLFSATLRDNLLLASPGSSDEALSEILRRVGLEKLLEDAGLNSWLGEGGRQLSG
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Template Sequence  WDLT. . . . . . . . . . . . . VAYKPQYIKAEYEGTVYELLSKIDSSKLNSNFYK. . . . . . . TELLKPLGIIDLYDRNVEDLSG
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   401... .....410.........420.........430........ .440.........450.........460
 
   478.480.........490.........500.........510.........520.. .......530........ .540...... ...550..
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Query Sequence  GELRRLAIARALLHDAPLVLLDEPTEGLDATTESQILELLAEMMR. . EKTVLMVTHRLRGLSR. FQQIIVMD. . NGQIIE
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Template Sequence  GELQRVAIAATLLRDADIYLLDEPSAYLDVEQRLAVSRAIRHLMEKNEKTALVVEHDVLMIDYVSDRLIVFEGEPGRHGR
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   461........470.........480.........490.........500.........510.........520.........530.........540
 
   553......560.
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Query Sequence  QGTHAELLA
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Template Sequence  ALPPMGMRE
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   541........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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