Job Description P23886 Confidence 97.28% Date Thu Jan 5 11:40:21 GMT 2012 Rank 101 Aligned Residues 170 % Identity 14% Template c3bh0A_ PDB info PDB header:replication Chain: A: PDB Molecule:dnab-like replicative helicase; PDBTitle: atpase domain of g40p Resolution 2.35 Å

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		363	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	N	A	G	E	H	I	A	I	L	G	R	T	G	C	G	K	S	T	L	L	Q	Q	L	T	R	A	W	D	P	Q	Q	G	E	I	L	L	N	D	S	P	I	A	S	L	N	E	A	A	L	R	Q	T	I	S	V	V	P	Q	R	V	H	L	F	S	A	T	L	R	D	N	L	L	L	A	S	P	G	S	S
Query Conservation
Alig confidence																																														.	.																	.	.	.	.	.	.	.
Template Conservation																																														.	.																	.	.	.	.	.	.	.
Template Sequence		Y	K	R	R	N	F	V	L	I	A	A	R	P	S	M	G	K	T	A	F	A	L	K	Q	A	K	N	M	S	D	N	D	D	V	V	N	L	H	S	L	E	M	G	K	.	.	K	E	N	I	K	R	L	I	V	T	A	G	S	I	N	A	.	.	.	.	.	.	.	Q	K	I	K	A	A	R	R	D	F	A
Template Known Secondary structure		B		T	T									T	T	S	S														T	T	T								S	S	S			.	.												T	T				.	.	.	.	.	.	.					S
Template Predicted Secondary structure																																														.	.																	.	.	.	.	.	.	.
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.			.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.								.	.	.	.	.	.	.	.	260	.	.
		443	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.		.	.	.	.	.	.	.	.								500	.	.	.	.	.	.	.	.	.	510	.	.	.	.
Predicted Secondary structure																																																			.									.	.	.	.	.	.	.
Query SS confidence																																																			.									.	.	.	.	.	.	.
Query Sequence		D	E	A	L	S	E	I	L	R	R	V	G	L	E	K	L	L	E	D	A	G	L	N	S	W	L	G	E	G	G	R	Q	L	S	G	G	E	L	R	R	L	A	I	A	R	A	L	L	H	.	D	A	P	L	V	L	L	D	.	.	.	.	.	.	.	E	P	T	E	G	L	D	A	T	T	E	S	Q	I	L
Query Conservation																																																			.									.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.																														.									.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.
Template Sequence		S	E	D	W	G	K	L	S	M	A	I	G	E	I	S	.	.	.	.	.	N	S	N	I	N	I	F	D	K	A	G	Q	S	V	N	Y	I	W	S	K	T	R	Q	T	K	R	K	N	P	G	K	R	V	I	V	M	I	D	Y	L	Q	L	L	E	P	A	K	A	N	D	S	R	T	N	Q	I	S	Q	I	S
Template Known Secondary structure		S	S														.	.	.	.	.	T	S								S			B														T	S	S	S										G	G	G	S	B		S		T	T	S
Template Predicted Secondary structure																	.	.	.	.	.
Template SS confidence
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.						.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
		515	.	.	.	.	520	.	.			.	.	.	.	.	.	.	530	.	.	.																					.	.	.	.	.	.	540	.	.	.	.	.	.
Predicted Secondary structure										.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	L	L	A	E	M	M	R	.	.	E	K	T	V	L	M	V	T	H	R	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	G	L	S	R	F	Q	Q	I	I	V	M	D
Query Conservation										.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	D	L	K	K	M	A	R	E	L	D	V	V	V	I	A	L	S	Q	L	S	R	Q	V	E	Q	R	Q	D	K	R	P	M	L	S	D	L	R	E	S	G	Q	L	E	Q	D	A	D	I	I	E	F	L	Y
Template Known Secondary structure												T											G	G	G	T	T	S	S	S					G	G	G	G	T	T	T	S							S
Template Predicted Secondary structure
Template SS confidence
		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions