Job Description P23886 Confidence 96.49% Date Thu Jan 5 11:40:21 GMT 2012 Rank 141 Aligned Residues 128 % Identity 17% Template c3b9qA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:chloroplast srp receptor homolog, alpha subunit PDBTitle: the crystal structure of cpftsy from arabidopsis thaliana Resolution 1.75 Å

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		358	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	S	L	Q	V	N	A	G	E	H	I	A	I	L	G	R	T	G	C	G	K	S	T	L	L	Q	Q	L	T	R	A	W	D	P	Q	Q	G	E	I	L	L	N	D	S	P	I	A	S	L	N	E	A	A	L	R	Q	T	I	S	V	V	P	Q	R	V	H	L	F	S	A	T	L	R	D	N	L	L	L	A
Query Conservation
Alig confidence																																				.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	L	Q	L	G	F	R	K	P	A	V	I	M	I	V	G	V	N	G	G	G	K	T	T	S	L	G	K	L	A	H	R	L	K	.	N	E	G	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	V	L	M	A	A	G	D	T	F	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S					S	S	S										T	T	S															.		T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										S	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																				.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.		190	.	.	.																			.	.	.	.	.	.	200	.	.	.
		438	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.		.	.	.	.	.	.	.	510	.	.	.	.	.	.
Predicted Secondary structure																																																																			.
Query SS confidence																																																																			.
Query Sequence		S	P	G	S	S	D	E	A	L	S	E	I	L	R	R	V	G	L	E	K	L	L	E	D	A	G	L	N	S	W	L	G	E	G	G	R	Q	L	S	G	G	E	L	R	R	L	A	I	A	R	A	L	L	H	D	A	P	L	V	L	L	D	E	P	T	.	E	G	L	D	A	T	T	E	S	Q	I	L	E	L
Query Conservation																																																																			.
Alig confidence		.																										.	.	.	.	.	.	.	.	.	.	.	.																												.
Template Conservation		.																										.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	R	A	A	A	S	D	Q	L	E	I	W	A	E	R	T	G	C	E	I	V	V	A	E	K	A	.	.	.	.	.	.	.	.	.	.	.	.	K	A	A	T	V	L	S	K	A	V	K	R	G	K	E	E	G	Y	D	V	V	L	C	D	T	S	G	R	L	H	T	N	Y	S	L	M	E	E	L	I	A	C
Template Known Secondary structure		.																T										.	.	.	.	.	.	.	.	.	.	.	.																T	T		S										S	S
Template Predicted Secondary structure		.																										.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
			204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.													.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
		517	.	.	520							.	.	.	.	.	.	.	.	.	530
Predicted Secondary structure						.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.
Query Sequence		L	A	E	M	.	.	.	.	.	.	M	R	E	K	T	V	L	M	V	T
Query Conservation						.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.
Template Conservation
Template Sequence		K	K	A	V	G	K	I	V	S	G	A	P	N	E	I	L	L	V	L	D
Template Known Secondary structure							T	T	S	T	T			S
Template Predicted Secondary structure
Template SS confidence
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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