Job Description P23886 Confidence 100.00% Date Thu Jan 5 11:40:21 GMT 2012 Rank 49 Aligned Residues 230 % Identity 25% Template c2ihyB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:abc transporter, atp-binding protein; PDBTitle: structure of the staphylococcus aureus putative atpase subunit of an2 atp-binding cassette (abc) transporter Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		339	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.			.	.	410	.	.	.	.	.	.
Predicted Secondary structure																																																																							.	.
Query SS confidence																																																																							.	.
Query Sequence		L	T	L	R	D	V	Q	F	T	Y	P	E	Q	S	Q	Q	A	L	K	G	I	S	L	Q	V	N	A	G	E	H	I	A	I	L	G	R	T	G	C	G	K	S	T	L	L	Q	Q	L	T	R	A	W	D	P	Q	Q	G	E	I	L	L	N	D	S	P	I	A	S	L	.	.	N	E	A	A	L	R	Q	T	I
Query Conservation																																																																							.	.
Alig confidence														.	.																																																								.	.
Template Conservation														.	.
Template Sequence		I	Q	L	D	Q	I	G	R	X	K	Q	G	.	.	K	T	I	L	K	K	I	S	W	Q	I	A	K	G	D	K	W	I	L	Y	G	L	N	G	A	G	K	T	T	L	L	N	I	L	N	A	Y	E	P	A	T	S	G	T	V	N	L	F	G	K	X	P	G	K	V	G	Y	S	A	E	T	V	R	Q	H	I
Template Known Secondary structure												T	T	.	.													T	T									T	T	S	S									T	T	S	S			S							T	T	B		T	T	S	T	T								T	T
Template Predicted Secondary structure														.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.			.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		417	.	.	420	.	.				.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.		440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.
Predicted Secondary structure								.	.	.																		.
Query SS confidence								.	.	.																		.
Query Sequence		S	V	V	P	Q	R	.	.	.	V	H	L	F	S	A	T	L	R	D	N	L	L	L	A	S	P	.	G	S	S	D	E	A	L	S	E	I	L	R	R	V	G	L	E	K	L	L	E	D	A	G	L	N	S	W	L	G	E	G	G	R	Q	L	S	G	G	E	L	R	R	L	A	I	A	R	A	L	L	H	D
Query Conservation								.	.	.																		.
Alig confidence								.	.	.																		.
Template Conservation
Template Sequence		G	F	V	S	H	S	L	L	E	K	F	Q	E	G	E	R	V	I	D	V	V	I	S	G	A	F	K	S	I	G	V	Y	Q	D	I	D	D	E	I	R	N	E	A	H	Q	L	L	K	L	V	G	X	S	A	K	A	Q	Q	Y	I	G	Y	L	S	T	G	E	K	Q	R	V	X	I	A	R	A	L	X	G	Q
Template Known Secondary structure										T	T	S		T	T	S	B							T	T	T						S	S	S																	T	T		G	G	G	T	T	S	B	G	G	G	S														T	T	T
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		493	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.				.	.	.	.	.	.	.	530	.	.	.	.	.	.		.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.	.															.
Query SS confidence																																.	.	.															.
Query Sequence		A	P	L	V	L	L	D	E	P	T	E	G	L	D	A	T	T	E	S	Q	I	L	E	L	L	A	E	M	M	R	.	.	.	E	K	T	V	L	M	V	T	H	R	L	R	G	L	.	S	R	F	Q	Q	I	I	V	M	D	N	G	Q	I	I	E	Q	G	T	H	A	E	L	L	A	R	Q	G	R	Y	Y	Q
Query Conservation																																.	.	.															.
Alig confidence																																.	.	.															.																													.
Template Conservation																																																																														.
Template Sequence		P	Q	V	L	I	L	D	E	P	A	A	G	L	D	F	I	A	R	E	S	L	L	S	I	L	D	S	L	S	D	S	Y	P	T	L	A	X	I	Y	V	T	H	F	I	E	E	I	T	A	N	F	S	K	I	L	L	L	K	D	G	Q	S	I	Q	Q	G	A	V	E	D	I	L	T	S	E	N	.	X	S	R
Template Known Secondary structure			S						S	T	T	T	T																					T	T								S		G	G	G			T	T									T	T												S	S				.
Template Predicted Secondary structure																																																																														.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.		.	.	.
		569	570	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	K	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	F	Q
Template Known Secondary structure				T
Template Predicted Secondary structure
Template SS confidence
		240	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions