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Job DescriptionP23886
Confidence100.00%DateThu Jan 5 11:40:21 GMT 2012
Rank12Aligned Residues221
% Identity33%Templatec2cbzA_
PDB info PDB header:transportChain: A: PDB Molecule:multidrug resistance-associated protein 1; PDBTitle: structure of the human multidrug resistance protein 12 nucleotide binding domain 1
Resolution1.5 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   337..340.........350.........360.........370.........380.........390.........400.........410......
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Query Sequence  VSLTLRDVQFTYPEQSQQALKGISLQVNAGEHIAILGRTGCGKSTLLQQLTRAWDPQQGEILLNDSPIASLNEAALRQTI
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Template Sequence  NSITVRNATFTWARSDPPTLNGITFSIPEGALVAVVGQVGCGKSSLLSALLAEMDKVEGHVAIKG. . . . . . . . . . . . . SV
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   642.......650.........660.........670.........680.........690.........700...... ..
 
   417..420.........430.........440.........450.........460 .........470.........480.........490....
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Query Sequence  SVVPQRVHLFSATLRDNLLLASPGSSDEALSEILRRVGLEKLLE. . DAGLNSWLGEGGRQLSGGELRRLAIARALLHDAP
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Template Sequence  AYVPQQAWIQNDSLRENILFGCQ. LEEPYYRSVIQACALLPDLEILPSGDRTEIGEKGVNLSGGQKQRVSLARAVYSNAD
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   709710.........720.........730. ........740.........750.........760.........770.........780.......
 
   495....500.........510....... ..520.........530.........540.........550.........560.........570.
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Query Sequence  LVLLDEPTEGLDATTESQILELL. . . AEMMREKTVLMVTHRLRGLSRFQQIIVMDNGQIIEQGTHAELLARQGRYYQFKQ
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Template Sequence  IYLFDDPLSAVDAHVGKHIFENVIGPKGMLKNKTRILVTHSMSYLPQVDVIIVMSGGKISEMGSYQELLARDGAFAEFLR
Template Known Secondary structure  STTTTS
TTSTTSTTTTS
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   788.790.........800.........810.........820.........830.........840.........850.........860.......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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