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Job DescriptionP23886
Confidence96.78%DateThu Jan 5 11:40:21 GMT 2012
Rank124Aligned Residues106
% Identity24%Templatec1xx6B_
PDB info PDB header:transferaseChain: B: PDB Molecule:thymidine kinase; PDBTitle: x-ray structure of clostridium acetobutylicum thymidine kinase with2 adp. northeast structural genomics target car26.
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   364.....370.........380. ........390.........400.........410.........420.........430.........440..
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Query Sequence  NAGEHIAILGRTGCGKST. LLQQLTRAWDPQQGEILLNDSPIASLNEAALRQTISVVPQRVHLFSATLRDNLLLASPGSS
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Template Sequence  DHGWVEVIVGPXYSGKSEELIRRIRRAKIAKQKIQVFKPEAVAIKNSREILKYFE. . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  T


STTSSTT





SSST

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   6...10.........20.........30.........40.........50.........60
 
   443......450.........460.........470.........480.........490.........500.........510.........520..
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Query Sequence  DEALSEILRRVGLEKLLEDAGLNSWLGEGGRQLSGGELRRLAIARALLHDAPLVLLDEPTEGLDATTESQILELLAEMMR
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . EDTEVIAIDE. VQFFDDEIVEIVNKIA. . . ES
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S
S.GGGS
T...T
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   80......... 90.........100..... ..
 
   523......530.. .......540......
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Query Sequence  EKTVLMVTHR. . . . . . . . . . . LRGLSRFQQIIVMD
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Template Sequence  GRRVICAGLDXDFRGKPFGPIPELXAIAEFVDKIQ
Template Known Secondary structure  T

SB
TTS
B
TT
S

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   108.110.........120.........130.........140..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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