Job Description P23886 Confidence 97.77% Date Thu Jan 5 11:40:21 GMT 2012 Rank 94 Aligned Residues 189 % Identity 24% Template c1wbdA_ PDB info PDB header:dna-binding Chain: A: PDB Molecule:dna mismatch repair protein muts; PDBTitle: crystal structure of e. coli dna mismatch repair enzyme2 muts, e38q mutant, in complex with a g.t mismatch Resolution 2.40 Å

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		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.				350	.	.	.	.	.	.	.	.	.	360	.	.
Predicted Secondary structure																																																																		.	.	.
Query SS confidence																																																																		.	.	.
Query Sequence		C	A	L	A	A	F	E	A	L	A	P	V	T	G	A	F	Q	H	L	G	Q	V	I	A	S	A	V	R	I	S	D	L	T	D	Q	K	P	E	V	T	F	P	D	T	Q	T	R	V	A	D	R	V	S	L	T	L	R	D	V	Q	F	T	Y	P	.	.	.	E	Q	S	Q	Q	A	L	K	G	I	S	L	Q
Query Conservation																																																																		.	.	.
Alig confidence																																										.	.																							.	.	.													.
Template Conservation																																										.	.																																						.
Template Sequence		L	Y	E	E	L	F	D	L	L	L	P	H	L	E	A	L	Q	Q	S	A	S	A	L	A	E	L	D	V	L	V	N	L	A	E	R	A	Y	T	L	N	.	.	Y	T	C	P	T	F	I	D	K	P	G	I	R	I	T	E	G	R	H	P	V	V	E	Q	V	L	N	E	P	F	I	A	N	P	L	N	L	.
Template Known Secondary structure											G	G	G																											T	T	.	.		B						S	S	S										T	T						S	S										.
Template Predicted Secondary structure																																										.	.																																						.
Template SS confidence
		527	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.			.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.
		363	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.		.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.			.	.	.	.	.
Predicted Secondary structure																																																									.																		.	.
Query SS confidence																																																									.																		.	.
Query Sequence		V	N	A	G	E	H	I	A	I	L	G	R	T	G	C	G	K	S	T	L	L	Q	Q	L	T	R	A	W	D	P	Q	Q	G	E	I	L	L	N	D	S	P	I	A	S	L	N	E	A	A	L	R	Q	T	I	S	.	V	V	P	Q	R	V	H	L	F	S	A	T	L	R	D	N	L	.	.	L	L	A	S	P
Query Conservation																																																									.																		.	.
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.							.	.										.	.				.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.															.	.
Template Sequence		S	P	Q	R	R	M	L	I	I	T	G	P	N	M	G	G	K	S	T	Y	M	R	Q	T	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	I	A	L	M	A	Y	I	G	S	Y	V	P	A	Q	K	.	.	V	E	I	G	P	I	D	R	I	F	T	R	V	G	.	.
Template Known Secondary structure			S	S	S									T	T	S	S										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T	T			B	S	S	S		.	.															.	.
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.															.	.
Template SS confidence
		604	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.																						.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.			.	.	.	.	.	650	.	.	.	.	.	.	.	.
		440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	S	S	D	E	A	L	S	E	I	L	R	R	V	G	L	E	K	L	L	E	D	A	G	L	N	S	W	L	G	E	G	G	R	Q	L	S	G	G	E	L	R	R	L	A	I	A	R	A	L	L	H	D	A	P	L	V	L	L	D	E	P	T	E	G	L	D	A	T	T	E	S	Q	I	L	E	L	L	A	E
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	M	V	E	M	T	E	T	A	N	I	L	H	N	A	T	E	Y	S	L	V	L	M	D	E	I	G	R	G	T	S	T	Y	D	G	L	S	L	A	W	A	C	A	E
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	T	T							S					S	S	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																						670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.
		520	.			.		.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.		.
Query SS confidence				.	.		.
Query Sequence		M	M	.	.	R	.	E	K	T	V	L	M	V	T	H	R	L	R	G	L	S	R
Query Conservation				.	.		.
Alig confidence				.	.		.
Template Conservation
Template Sequence		N	L	A	N	K	I	K	A	L	T	L	F	A	T	H	Y	F	E	L	T	Q	L
Template Known Secondary structure						T	T									S		G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		714	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions