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Job DescriptionP23886
Confidence93.98%DateThu Jan 5 11:40:21 GMT 2012
Rank363Aligned Residues105
% Identity18%Templatec1fx0B_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:atp synthase beta chain; PDBTitle: crystal structure of the chloroplast f1-atpase from spinach
Resolution3.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   361........370.........380.........390.........400.........410.........420.........430.........440
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Query Sequence  LQVNAGEHIAILGRTGCGKSTLLQQLTRAWDPQQGEILLNDSPIASLNEAALRQTISVVPQRVHLFSATLRDNLLLASPG
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Template Sequence  APYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSV. . . . . . . . . . . . . . . . . . FGG. . . . . . . . . . . . . . . VGERT
Template Known Secondary structure  S


TT


SSSSTTTT
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   160.........170.........180.........190........ .200. .....
 
   441........450.........460.........470.........480.. .......490 ........
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Query Sequence  SSDEALSEILRRVGLEKLLEDAGLNSWLGEGGRQLSGGELRR. . . . . LAIARALL. . HDAPLVLL
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Template Sequence  REGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLF
Template Known Secondary structure  TTSS
SSTT




TTS
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   207..210.........220.........230.........240.........250.........260.........270.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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