Job Description P23886 Confidence 97.90% Date Thu Jan 5 11:40:21 GMT 2012 Rank 92 Aligned Residues 194 % Identity 23% Template c1ewqA_ PDB info PDB header:replication/dna Chain: A: PDB Molecule:dna mismatch repair protein muts; PDBTitle: crystal structure taq muts complexed with a heteroduplex2 dna at 2.2 a resolution Resolution 2.20 Å

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		289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.
Predicted Secondary structure																																																															.
Query SS confidence																																																															.
Query Sequence		A	A	F	E	A	L	A	P	V	T	G	A	F	Q	H	L	G	Q	V	I	A	S	A	V	R	I	S	D	L	T	D	Q	K	P	E	V	T	F	P	D	T	Q	T	R	V	A	D	R	V	S	L	T	L	R	D	V	Q	F	T	Y	P	.	E	Q	S	Q	Q	A	L	K	G	I	S	L	Q	V	N	A	G	E
Query Conservation																																																															.
Alig confidence																																																			.												.														.	.	.
Template Conservation																																																			.																										.	.	.
Template Sequence		V	F	L	E	V	R	E	R	A	K	R	Q	A	E	A	L	R	E	A	A	R	I	L	A	E	L	D	V	Y	A	A	L	A	E	V	A	V	R	Y	G	Y	V	R	P	R	F	G	D	R	.	L	Q	I	R	A	G	R	H	P	V	V	E	R	R	T	E	F	V	P	N	D	L	E	X	A	.	.	.	H	E
Template Known Secondary structure												T	T																												T		B					S	S	S	.									T	T	G	G	G	T	S										S	.	.	.	S
Template Predicted Secondary structure																																																			.																										.	.	.
Template SS confidence
		502	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550		.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.				.	.
		368	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.		.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.
Predicted Secondary structure																																																				.
Query SS confidence																																																				.
Query Sequence		H	I	A	I	L	G	R	T	G	C	G	K	S	T	L	L	Q	Q	L	T	R	A	W	D	P	Q	Q	G	E	I	L	L	N	D	S	P	I	A	S	L	N	E	A	A	L	R	Q	T	I	S	.	V	V	P	Q	R	V	H	L	F	S	A	T	L	R	D	N	L	L	L	A	S	P	G	S	S	D	E	A	L
Query Conservation																																																				.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	V	L	I	T	G	P	N	X	A	G	K	S	T	F	L	R	Q	T	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	I	A	L	L	A	Q	V	G	S	F	V	P	A	E	E	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure							S		S	S	S	S										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T	T			B	S	S	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		578	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.																						.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.
		447	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.			.	.
Predicted Secondary structure																																																																														.	.
Query SS confidence																																																																														.	.
Query Sequence		S	E	I	L	R	R	V	G	L	E	K	L	L	E	D	A	G	L	N	S	W	L	G	E	G	G	R	Q	L	S	G	G	E	L	R	R	L	A	I	A	R	A	L	L	H	D	A	P	L	V	L	L	D	E	P	T	E	G	L	D	A	T	T	E	S	Q	I	L	E	L	L	A	E	M	M	R	.	.	E	K
Query Conservation																																																																														.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																						.																																													.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.																						.
Template Sequence		.	.	.	.	.	.	.	.	.	.	H	L	P	L	F	D	G	I	Y	T	R	I	G	A	G	K	S	T	F	X	V	.	E	X	E	E	V	A	L	I	L	K	E	A	T	E	N	S	L	V	L	L	D	E	V	G	R	G	T	S	S	L	D	G	V	A	I	A	T	A	V	A	E	A	L	H	E	R	R	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.						S											S					.														T	T							S	T	T	T	T	S																				T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																						.
Template SS confidence
												615	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.		.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.
		525	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540
Predicted Secondary structure
Query SS confidence
Query Sequence		T	V	L	M	V	T	H	R	L	R	G	L	S	R	F	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	T	L	F	A	T	H	Y	F	E	L	T	A	L	G	L
Template Known Secondary structure														T
Template Predicted Secondary structure
Template SS confidence
		690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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