Job Description P0ACL0 Confidence 96.51% Date Thu Jan 5 11:18:24 GMT 2012 Rank 130 Aligned Residues 147 % Identity 14% Template c3kv1A_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcriptional repressor; PDBTitle: crystal structure of putative sugar-binding domain of transcriptional2 repressor from vibrio fischeri Resolution 1.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		75	.	.	.	.	80	.	.	.	.	.	.	.	.					.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure																.	.	.	.
Query SS confidence																.	.	.	.
Query Sequence		T	E	E	K	E	R	I	A	R	K	V	A	E	Q	.	.	.	.	I	P	N	G	S	T	L	F	I	D	I	G	T	T	P	E	A	V	A	H	A	L	L	N	H	S	N	L	R	I	V	T	N	N	L	N	V	A	N	T	L	M	V	K	E	D	F	R	I	I	L	A	G	G	E	L	R	S	R	D	G	G
Query Conservation																.	.	.	.
Alig confidence																.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Template Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Template Sequence		N	E	Q	R	K	Q	V	A	A	L	V	S	S	Y	L	N	N	N	L	Q	E	G	X	A	V	A	V	G	Q	G	Q	N	V	A	A	V	A	D	H	A	G	I	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	Q	R	N	A	R	F	V	S	A	I	G	G	T	H	I	I	N	.	.
Template Known Secondary structure																						T	T								S														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										S	B		B						.	.
Template Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.																		.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure
Query SS confidence
Query Sequence		I	I	G	E	A	T	L	D	F	I	S	Q	F	R	L	D	F	G	I	L	G	I	S	G	I	D	S	D	G	S	L	L	E	F	D	Y	H	E	V	R	T	K	R	A	I	I	E	N	S	R	H	V	M	L	V	V	D	H	S	K	F	G	R	N	A	M	V	N	M	G	S	I	S	M	V	D	A	V	Y	T
Query Conservation
Alig confidence		.																																																							.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.																																																							.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	A	D	H	I	C	R	R	L	A	K	K	Y	G	G	S	S	E	T	L	Y	A	P	A	Y	V	N	D	P	S	L	R	S	A	F	X	E	H	A	T	I	K	E	T	L	S	Q	A	R	K	A	E	F	A	L	.	.	.	.	.	.	.	.	.	.	.	V	G	I	G	D	X	D	E	N	S	H	X	V	K
Template Known Secondary structure		.													T								S	B	S	B		S	S									T	S												T		S				.	.	.	.	.	.	.	.	.	.	.										T
Template Predicted Secondary structure		.																																																							.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
			97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150												.	.	.	.	.	.	.	.	.	160	.	.	.	.
		231	.	.	.	.	.	.	.	.		240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		D	A	P	P	P	V	S	V	M	.	Q	V	L	T	D	H	H	I	Q	L	E	L	C
Query Conservation											.
Alig confidence											.
Template Conservation
Template Sequence		L	G	F	F	T	P	K	E	F	V	E	A	R	L	N	D	G	I	V	G	D	I	G
Template Known Secondary structure		T	T	S	S											T	T							T
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions