Job Description P0ACL0 Confidence 98.04% Date Thu Jan 5 11:18:24 GMT 2012 Rank 27 Aligned Residues 155 % Identity 16% Template c3ecsD_ PDB info PDB header:translation Chain: D: PDB Molecule:translation initiation factor eif-2b subunit PDBTitle: crystal structure of human eif2b alpha Resolution 2.65 Å

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		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.			.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120								.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure																																.	.																	.	.	.	.	.	.	.
Query SS confidence																																.	.																	.	.	.	.	.	.	.
Query Sequence		T	E	E	K	E	R	I	A	R	K	V	A	E	Q	I	P	N	G	S	T	L	F	I	D	I	G	T	T	P	E	.	.	A	V	A	H	A	L	L	N	H	S	N	L	R	I	V	T	.	.	.	.	.	.	.	N	N	L	N	V	A	N	T	L	M	V	K	E	D	F	R	I	I	L	A	G	G	E	L	R
Query Conservation																																.	.																	.	.	.	.	.	.	.
Alig confidence																																.	.																	.	.	.	.	.	.	.												.									.	.	.	.	.
Template Conservation																																																																				.									.	.	.	.	.
Template Sequence		S	L	S	R	N	K	I	A	D	L	C	H	T	F	I	K	D	G	A	T	I	L	T	H	A	Y	S	R	V	V	L	R	V	L	E	A	A	V	A	A	K	K	R	F	S	V	Y	V	T	E	S	Q	P	D	L	S	G	K	K	X	A	K	A	L	C	H	.	L	N	V	P	V	T	V	V	.	.	.	.	.
Template Known Secondary structure														T	T			T	T							S															T	T											T	T	T	T											T	.	T	T							.	.	.	.	.
Template Predicted Secondary structure																																																																				.									.	.	.	.	.
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170		.	.	.	.	.	.	.	.
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure																																																																									.	.	.	.	.	.	.	.	.
Query SS confidence																																																																									.	.	.	.	.	.	.	.	.
Query Sequence		S	R	D	G	G	I	I	G	E	A	T	L	D	F	I	S	Q	F	R	L	D	F	G	I	L	G	I	S	G	I	D	S	D	G	S	L	L	E	F	D	Y	H	E	V	R	T	K	R	A	I	I	E	N	S	R	H	V	M	L	V	V	D	H	S	K	F	G	R	N	A	M	.	.	.	.	.	.	.	.	.
Query Conservation																																																																									.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.																																	.																															.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.																																	.
Template Sequence		.	.	.	.	.	.	.	.	L	D	A	A	V	G	Y	I	X	E	K	A	D	L	V	I	V	G	A	E	G	V	V	E	N	G	G	I	I	N	K	I	.	G	T	N	Q	X	A	V	C	A	K	A	Q	N	K	P	F	Y	V	V	A	E	S	F	K	F	V	R	L	F	P	L	N	Q	Q	D	V	P	D	K
Template Known Secondary structure		.	.	.	.	.	.	.	.		G	G	G					G	G	G		S							S				T	T	S						T	.	T											T	T									G	G	G	B		S				S	S	G	G	G	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																																	.
Template SS confidence
										179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210		.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
																		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.			.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	N	M	G	S	I	S	M	V	D	A	V	Y	T	D	A	P	.	.	P	P	V	S	V	M	Q	V	L	T	D
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Template Conservation
Template Sequence		F	K	Y	K	A	D	G	Q	D	L	K	E	E	H	P	W	V	D	Y	T	A	P	S	L	I	T	L	L	F	T	D	L	G	V	L	T	P	S	A	V	S	D	E	L	I	K
Template Known Secondary structure				S	S					S							S						G	G	G		S					T	T					G	G	G
Template Predicted Secondary structure
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions