Job Description P0ACL0 Confidence 98.11% Date Thu Jan 5 11:18:24 GMT 2012 Rank 24 Aligned Residues 148 % Identity 17% Template c3a11D_ PDB info PDB header:isomerase Chain: D: PDB Molecule:translation initiation factor eif-2b, delta PDBTitle: crystal structure of ribose-1,5-bisphosphate isomerase from2 thermococcus kodakaraensis kod1 Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	E	E	K	E	R	I	A	R	K	V	A	E	Q	I	P	N	G	S	T	L	F	I	D	I	G	T	T	P	E	A	V	A	H	A	L	L	N	H	S	N	L	R	I	V	T	N	N	L	N	V	A	N	T	L	M	V	K	E	D	F	R	I	I	L	A	G	G	E	L	R	S	R	D	G	G	I	I	G	E
Query Conservation
Alig confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.
Template Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.
Template Sequence		E	K	A	L	E	R	I	G	E	F	G	A	K	R	I	E	D	G	D	V	I	M	T	H	C	H	S	K	A	A	I	S	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	K	T	A	W	E	Q	G	K	D	I	K	V	I	V	T	.	.	.	.	.	E	T	R	P	K	W	Q	G	K
Template Known Secondary structure			T											T	T			T	T							S									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T									.	.	.	.	.			T	T	T	T
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.																		.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.						.	.	160	.	.	.	.	.	.
		155	.	.	.	.	160	.	.	.																		.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																					.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																					.	.
Query Sequence		A	T	L	D	F	I	S	Q	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	L	D	F	G	I	L	G	I	S	G	I	D	S	D	G	S	L	L	E	F	D	Y	H	E	V	R	T	K	R	A	I	I	E	N	S	R	H	V	M	L	V	V	D	H	S	K	F	G	R	N	A	.	.
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																					.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.																														.	.
Template Conservation																																																		.
Template Sequence		I	T	A	K	E	L	A	S	Y	G	I	P	V	I	Y	V	V	D	S	A	A	R	H	Y	M	K	M	T	D	K	V	V	M	G	A	D	S	I	T	V	N	G	A	V	I	N	K	I	.	G	T	A	L	I	A	L	T	A	K	E	H	R	V	W	T	M	I	A	A	E	T	Y	K	F	H	P	E	T	M	L
Template Known Secondary structure										T	T								G	G	G	T	T	T	T	G	G	G		S							S				T	T							T	.	T											T	T									G	G	G	B		S	S			T
Template Predicted Secondary structure																																																		.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.		.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
																																216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.			.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	V	N	M	G	S	I	S	M	V	D	A	V	Y	T	D	A	P	.	.	P	P	V	S	V	M	Q	V	L	T	D	H
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Template Conservation
Template Sequence		G	Q	L	V	E	M	R	D	P	T	E	V	I	P	E	D	E	L	K	T	W	P	K	N	I	E	V	W	N	P	A	F	D	V	T	P	P	E	Y	V	D	V	I	I	T	E	R	G	I	I	P	P	Y	A	A	I	D	I	L	R	E	E
Template Known Secondary structure		T	T	T			B			G	G	G	T	S						T	T	S		S	S						B	S						G	G	G		S					T	T					G	G	G
Template Predicted Secondary structure
Template SS confidence
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions