Job Description P04982 Confidence 100.00% Date Wed Jan 25 15:20:11 GMT 2012 Rank 1 Aligned Residues 138 % Identity 86% Template c3e7nB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:d-ribose high-affinity transport system; PDBTitle: crystal structure of d-ribose high-affinity transport system from2 salmonella typhimurium lt2 Resolution 2.45 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	K	G	T	V	L	N	S	D	I	S	S	V	I	S	R	L	G	H	T	D	T	L	V	V	C	D	A	G	L	P	I	P	K	S	T	T	R	I	D	M	A	L	T	Q	G	V	P	S	F	M	Q	V	L	G	V	V	T	N	E	M	Q	V	E	A	A	I	I	A	E	E	I	K	H	H	N	P	Q	L	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	K	G	T	V	L	N	S	E	I	S	S	V	I	S	R	L	G	H	T	D	T	L	V	V	C	D	A	G	L	P	I	P	N	S	T	A	R	I	D	X	A	L	T	Q	G	V	P	S	F	X	Q	V	V	D	V	V	T	R	E	X	Q	V	E	A	A	I	L	A	T	E	I	K	Q	Q	N	P	Q	L	H
Template Known Secondary structure		S	S	S	S															T	T								T	T					T	T	S								B	T	T	B	S													S									T
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	T	L	L	T	H	L	E	Q	L	Q	K	H	Q	G	N	T	I	E	I	R	Y	T	T	H	E	Q	F	K	Q	Q	T	A	E	S	Q	A	V	I	R	S	G	E	C	S	P	Y	A	N	I	I	L	C	A	G	V	T	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	T	L	L	T	H	L	E	Q	L	Q	Q	H	Q	G	N	T	I	K	I	S	Y	T	T	H	E	Q	F	K	K	L	T	A	D	S	Q	A	V	I	R	S	G	E	C	S	P	Y	A	N	V	I	L	C	A	G	V	T	F
Template Known Secondary structure																T	S																	T	T	S	S									S	T	T
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions