Return to main results Retrieve Phyre Job Id

Job DescriptionP04982
Confidence100.00%DateWed Jan 25 15:20:11 GMT 2012
Rank6Aligned Residues136
% Identity21%Templatec2wcuB_
PDB info PDB header:isomeraseChain: B: PDB Molecule:protein fucu homolog; PDBTitle: crystal structure of mammalian fucu
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.. .....10.........20.........30.........40.........50... ......60.........70....
Predicted Secondary structure 


..
























....












.
Query SS confidence 


. .
















































. . . .




















.
Query Sequence  KKG. . TVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQ. . . . VLGVVTNEMQVEAAIIAEEIK.
Query Conservation   
 .. 

 
 

  

 




 





  
       
 
    
 
    ....

  
  
  

      
  .
Alig confidence 


..
















































....




















.
Template Conservation 

 
  





   

 




 





  
       


 
  
      

 


   


  
      
  
 
Template Sequence  LKGIPKVLSPELLFALARMGHGDEIVLADANFPTSSICQCGPVEIRADGLDIPQLLEAVLRLLPLDTYVESPAAVMDLVP
Template Known Secondary structure 
TTS
TTS


TT

TTS
TTS
TT



B
SSSS
S


Template Predicted Secondary structure 

































Template SS confidence 















































































   4.....10.........20.........30.........40.........50.........60.........70.........80...
 
   75....80.........90.........100.........110.........120.........130........
Predicted Secondary structure  ..























Query SS confidence  . .































































Query Sequence  . . HHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVIRSGECSPYANIILCAGVT
Query Conservation  ..                             
 
  

  
  
  

 


   





  


Alig confidence  ..






















.







































Template Conservation          
 
       
      .  
  
 
  

  
  
  





   





  


Template Sequence  SDKEKGLQTPIWKRYESLLLEADCK. KTLMKLERFEFYERAKKAFAVVATGEMALYGNIILKKGTL
Template Known Secondary structure  TT


TTT

.



TSS


STT

B


Template Predicted Secondary structure 













.















Template SS confidence 

































































   84.....90.........100........ .110.........120.........130.........140........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions