Return to main results Retrieve Phyre Job Id

Job DescriptionP04982
Confidence21.33%DateWed Jan 25 15:20:11 GMT 2012
Rank11Aligned Residues75
% Identity12%Templatec2jerG_
PDB info PDB header:hydrolaseChain: G: PDB Molecule:agmatine deiminase; PDBTitle: agmatine deiminase of enterococcus faecalis catalyzing its2 reaction.
Resolution1.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   65....70.........80.........90... ......100.........110.........120....... ..130.
Predicted Secondary structure 










...















..........
Query SS confidence 




























. . .

































. . . . . . . . . .



Query Sequence  EAAIIAEEIKHHNPQLHETLLTHLEQLQK. . . HQGNTIEIRYTTHEQFKQQTAESQAVIRSGECSP. . . . . . . . . . YANI
Query Conservation 
      
                     ...          
 
  

  
  
  

 


   ..........



Alig confidence 




























...

































..........



Template Conservation     

     
               
   

  
    
  

 
                          
 


 

Template Sequence  PGEVACIYTEDQNSPFYEAAQDAYQRLLKMTDAKGRQLKVHKLCCPVKNVTIKGSFKIDFVEGTMPREDGDICIASYMNF
Template Known Secondary structure  TT



TTSTTTT
B
TT

B



SS


SS





TTS



TT



TT

Template Predicted Secondary structure 






















































Template SS confidence 















































































   228.230.........240.........250.........260.........270.........280.........290.........300.......
 
   132.......
Predicted Secondary structure 



Query SS confidence 







Query Sequence  ILCAGVTF
Query Conservation 

  



Alig confidence 







Template Conservation 

 
  

Template Sequence  LITNDGVI
Template Known Secondary structure  TT
Template Predicted Secondary structure 

Template SS confidence 







   308.310.....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions