Return to main results Retrieve Phyre Job Id

Job DescriptionP04982
Confidence7.27%DateWed Jan 25 15:20:11 GMT 2012
Rank53Aligned Residues15
% Identity27%Templatec1yj5C_
PDB info PDB header:transferaseChain: C: PDB Molecule:5' polynucleotide kinase-3' phosphatase fha domain; PDBTitle: molecular architecture of mammalian polynucleotide kinase, a dna2 repair enzyme
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   18.20.........30..
Predicted Secondary structure 








Query SS confidence 














Query Sequence  LGHTDTLVVCDAGLP
Query Conservation 




 





  
Alig confidence 














Template Conservation 
  

 
 
      
Template Sequence  LSLGDVLYLVNGLYP
Template Known Secondary structure 
TT
SSSS
S
Template Predicted Secondary structure 





Template SS confidence 














   87..90.........100.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions