Job Description P0AD65 Confidence 100.00% Date Thu Jan 5 11:20:07 GMT 2012 Rank 22 Aligned Residues 328 % Identity 16% Template d2olua2 SCOP info beta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like beta-Lactamase/D-ala carboxypeptidase Resolution 2.90

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270									.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.
Query Sequence		P	Q	A	G	H	D	I	Y	L	T	L	D	L	K	L	Q	Q	Y	I	E	T	L	L	A	G	S	R	.	.	.	.	.	.	.	.	A	A	V	V	V	T	D	P	R	T	G	G	V	L	A	L	V	S	T	P	S	Y	D	P	N	L	F	V	D	G	I	S	S	K	D	Y	S	A	L	L	N	D	P	N	T
Query Conservation																													.	.	.	.	.	.	.	.
Alig confidence																													.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	Q	S	G	I	K	I	Y	T	N	X	D	K	D	V	Q	K	T	L	Q	N	D	V	D	N	G	S	F	Y	K	N	K	D	Q	Q	V	G	A	T	I	L	D	S	K	T	G	G	L	V	A	I	S	G	G	R	D	F	K	D	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T	T	S																								S			S	S	T	T										T	T	T		B							S	T	T			T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.		.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		P	L	V	N	R	A	T	Q	G	V	Y	P	P	A	S	T	V	K	P	Y	V	.	A	V	S	A	L	S	A	G	V	I	T	R	N	T	T	L	F	D	P	G	W	W	Q	L	P	G	S	E	K	R	Y	R	D	W	K	K	W	G	H	G	R	L	N	V	T	R	S	L	E	E	S	A	D	T	F	F	Y	Q
Query Conservation																							.
Alig confidence		.																					.																											.	.
Template Conservation		.																																																.	.
Template Sequence		.	V	N	R	N	Q	A	T	D	P	H	P	T	G	S	S	L	K	P	F	L	A	Y	G	P	A	I	E	N	X	K	W	A	T	N	H	A	I	Q	D	E	S	S	Y	Q	V	D	G	.	.	S	T	F	R	N	Y	D	T	K	S	H	G	T	V	S	I	Y	D	A	L	R	Q	S	F	N	I	P	A	L	K
Template Known Secondary structure		.	T	S			T	T	T	S					G	G	G	G					T								T				T	T	B						S	S				T	T	.	.						T	T	S														T	T
Template Predicted Secondary structure		.																																																.	.
Template SS confidence
			385	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.			.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.
		395	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	Y	D	M	G	I	D	R	L	S	E	W	M	G	K	F	G	Y	G	H	Y	T	G	I	D	L	A	E	E	R	S	G	N	M	P	T	R	E	W	K	Q	K	R	F	K	K	P	W	Y	Q	G	D	T	I	P	V	G	I	G	Q	G	Y	W	T	A	T	P	I	Q	M	S	K	A	L	M	I	L	I	N
Query Conservation
Alig confidence																					.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	W	Q	S	V	K	Q	N	A	G	N	D	A	P	K	K	F	A	A	.	.	K	L	G	L	N	Y	E	G	D	I	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	S	E	V	L	G	G	S	A	S	E	F	S	P	T	Q	L	A	S	A	F	A	A	I	A	N
Template Known Secondary structure										T		T	T								.	.		T	T				S	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T		T	T																	T
Template Predicted Secondary structure																					.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		462	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480			.	.	.	.	.	.	.	.	.	490	.																							.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.
		475	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	G	I	V	K	V	P	H	L	L	M	S	T	A	E	D	G	K	Q	V	P	W	V	Q	P	H	E	P	P	V	G	D	I	H	S	G	Y	W	E	L	A	K	D	G	M	Y	G	V	A	N	R	P	N	G	T	A	H	K	Y	F	A	S	A	P	Y	K	I	A	A	K	S	G	T	A	Q	V	F	G	L	K
Query Conservation
Alig confidence																								.	.																												.					.
Template Conservation																								.	.																												.					.
Template Sequence		G	G	T	Y	N	N	A	H	S	I	Q	K	V	V	T	R	D	G	E	T	I	E	.	.	Y	D	H	T	S	H	K	A	X	S	D	Y	T	A	Y	X	L	A	E	X	L	K	G	T	F	K	P	.	Y	G	S	A	.	Y	G	H	G	V	S	G	V	N	X	G	A	K	T	G	T	G	T	Y	G	A	E	T
Template Known Secondary structure		T	S						B								T	T	S					.	.									S														G	G	G	S	T	.	T	S	T	T	.	T	T				S	S
Template Predicted Secondary structure																								.	.																												.					.
Template SS confidence
		518	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.			540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.		.	.	.	570		.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.
		555	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.														.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	N	E	T	Y	N	A	H	K	I	A	E	R	L	R	D	H	K	L	M	T	A	F	A	P	Y	N	N	P	Q	V	A	V	A	M	I	L	E	N	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	P	A	V	G	T	L	M	R	Q	I	L	D	H	I	M	L	G	D	N	N	T	D	L	P
Query Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.														.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template Conservation									.	.	.	.														.	.	.	.																																											.
Template Sequence		Y	S	Q	Y	N	L	P	.	.	.	.	D	N	A	A	K	D	V	W	I	N	G	F	T	.	.	.	.	P	Q	Y	T	X	S	V	W	X	G	F	S	K	V	K	Q	Y	G	E	N	S	F	V	G	H	S	Q	Q	E	Y	P	Q	F	L	Y	E	N	V	X	S	K	I	.	S	S	R	D	G	E	D	F	K
Template Known Secondary structure					T	T			.	.	.	.	T	T			S									.	.	.	.	S	S										S	S			G	G	G	T	T	S			S					T														.	S			S
Template Predicted Secondary structure									.	.	.	.														.	.	.	.																																											.
Template SS confidence
		594	.	.	.	.	.	600					.	.	.	.	.	.	.	.	.	610	.	.	.					.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.		.	.	.	.	660	.	.	.	.
		622	.	.	.	.	.	.	.	630	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	N	P	A	V	A	A	A	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	P	S	S	V	S	G	S	I	P
Template Known Secondary structure				T	T			S		T	T
Template Predicted Secondary structure
Template SS confidence
		665	.	.	.	.	670	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions