Job Description P0AD65 Confidence 100.00% Date Thu Jan 5 11:20:07 GMT 2012 Rank 21 Aligned Residues 310 % Identity 21% Template d2bg1a1 SCOP info beta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like beta-Lactamase/D-ala carboxypeptidase Resolution 1.9

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		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.												.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	A	G	H	D	I	Y	L	T	L	D	L	K	L	Q	Q	Y	I	E	T	L	L	A	G	.	.	.	.	.	.	.	.	.	.	.	S	R	A	A	V	V	V	T	D	P	R	T	G	G	V	L	A	L	V	S	T	P	S	Y	D	P	N	L	F	V	D	G	I	S	S	K	D	Y	S	A	L	L	N	D	P
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	G	G	Y	K	I	T	T	T	I	D	Q	K	I	H	S	A	M	Q	S	A	V	A	D	Y	G	Y	L	L	D	D	G	T	G	R	V	E	V	G	N	V	L	M	D	N	Q	T	G	A	I	L	G	F	V	G	G	R	N	Y	Q	E	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T	S																								G	G	G	G			S	S	S	S										T	T	T		B								S		T	T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		385	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.		.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
Predicted Secondary structure																									.
Query SS confidence																									.
Query Sequence		N	T	P	L	V	N	R	A	T	Q	G	V	Y	P	P	A	S	T	V	K	P	Y	V	.	A	V	S	A	L	S	A	G	V	I	T	R	N	T	T	L	F	D	P	G	W	W	Q	L	P	G	S	E	K	R	Y	R	D	W	K	K	W	G	H	G	R	L	N	V	T	R	S	L	E	E	S	A	D	T	F	F
Query Conservation																									.
Alig confidence		.	.	.																					.																											.	.
Template Conservation		.	.	.																																																.	.
Template Sequence		.	.	.	Q	N	N	H	A	F	D	T	K	R	S	P	A	S	T	T	K	P	L	L	A	Y	G	I	A	I	D	Q	G	L	M	G	S	E	T	I	L	S	N	Y	P	T	N	F	A	N	G	.	.	N	P	I	M	Y	A	N	S	K	G	T	G	M	M	T	L	G	E	A	L	N	Y	S	W	N	I	P	A
Template Known Secondary structure		.	.	.				T	T	T	T			B			G	G	G	G					T							T	T	S			T	T						S			B		T	T	S	.	.		B			B	T	T	B															T		S
Template Predicted Secondary structure		.	.	.																																																.	.
Template SS confidence
					447	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.			.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.
		393	.	.	.	.	.	.	400	.	.			.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470
Predicted Secondary structure												.	.
Query SS confidence												.	.
Query Sequence		Y	Q	V	A	Y	D	M	G	I	D	.	.	R	L	S	E	W	M	G	K	F	G	Y	G	H	Y	T	G	I	D	L	A	E	E	R	S	G	N	M	P	T	R	E	W	K	Q	K	R	F	K	K	P	W	Y	Q	G	D	T	I	P	V	G	I	G	Q	G	Y	W	T	A	T	P	I	Q	M	S	K	A	L	M
Query Conservation												.	.
Alig confidence												.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.
Template Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.
Template Sequence		Y	W	T	Y	R	M	L	R	E	N	G	V	D	V	K	G	Y	M	E	K	M	G	Y	E	I	P	E	Y	G	I	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	L	P	M	G	G	G	.	I	E	V	T	V	A	Q	H	T	N	G	Y	Q
Template Known Secondary structure											T	T										T	T				S					T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	G	G	G	T	T	T	.			B
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.
Template SS confidence
		522	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.																													.	.	.	.	.	.	.		560	.	.	.	.	.	.	.	.	.	570	.	.
		471	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.							.	.	.	.	.	.	.	540	.	.	.	.
Predicted Secondary structure																																																																.	.	.	.	.	.
Query SS confidence																																																																.	.	.	.	.	.
Query Sequence		I	L	I	N	D	G	I	V	K	V	P	H	L	L	M	S	T	A	E	D	G	K	Q	V	P	W	V	Q	P	H	E	P	P	V	G	D	I	H	S	G	Y	W	E	L	A	K	D	G	M	Y	G	V	A	N	R	P	N	G	T	A	H	K	.	.	.	.	.	.	Y	F	A	S	A	P	Y	K	I	A	A	K
Query Conservation																																																																.	.	.	.	.	.
Alig confidence																													.																																			.	.	.	.	.	.
Template Conservation																													.
Template Sequence		T	L	A	N	N	G	V	Y	H	Q	K	H	V	I	S	K	I	E	A	A	D	G	R	V	V	Y	E	.	Y	Q	D	K	P	V	Q	V	Y	S	K	A	T	A	T	I	M	Q	G	L	L	R	E	V	L	S	S	R	V	T	T	T	F	K	S	N	L	T	S	L	N	P	T	L	A	N	A	D	W	I	G	K
Template Known Secondary structure					T	T	T						B	S							T	T	S						.									S																		T		S	S																T	S
Template Predicted Secondary structure																													.
Template SS confidence
		573	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.		600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.
		545	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.									.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.	.	.
Query Sequence		S	G	T	A	Q	V	F	G	L	K	A	N	E	T	Y	N	A	H	K	I	A	E	R	L	R	D	H	K	L	M	T	A	F	A	P	Y	N	N	P	Q	V	A	V	A	M	I	L	E	N	G	.	.	.	.	.	.	.	.	G	A	G	P	A	V	G	T	L	M	R	Q	I	L	D	H	I	M	L	G	D	N
Query Conservation																																																				.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.													.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.
Template Sequence		T	G	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	Q	D	E	N	M	W	L	M	L	S	T	.	.	.	.	P	R	L	T	L	G	G	W	I	G	H	D	D	N	H	S	L	S	Q	Q	A	G	Y	S	N	N	S	N	Y	M	A	H	L	V	N	A	I	Q	Q	A	S	P
Template Known Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T		S									.	.	.	.	S	S										T	T						T	T	T	T	T	T																	S	T
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.
Template SS confidence
		652	.	.	.																			.	.	.	.	660	.	.	.	.	.	.	.					.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.
		617	.	.	620	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	T	D	L	P	A	E	N	P	A	V	A	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	I	W	G	N	E	R	F	A	L	D	P	S
Template Known Secondary structure		T	S	S		S							T	T
Template Predicted Secondary structure
Template SS confidence
		710	.	.	.	.	.	.	.	.	.	720	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions