Job Description P0AD65 Confidence 100.00% Date Thu Jan 5 11:20:07 GMT 2012 Rank 32 Aligned Residues 187 % Identity 26% Template d1vqqa2 SCOP info Penicillin binding protein dimerisation domain Penicillin binding protein dimerisation domain Penicillin binding protein dimerisation domain Resolution 1.80

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.		.	.	.	.	130	.	.	.	.
Predicted Secondary structure																																																																								.
Query SS confidence																																																																								.
Query Sequence		E	N	R	I	K	L	V	P	I	A	P	S	R	G	I	I	Y	D	R	N	G	I	P	L	A	L	N	R	T	I	Y	Q	I	E	M	M	P	E	K	V	D	N	V	Q	Q	T	L	D	A	L	R	S	V	V	D	L	T	D	D	D	I	A	A	F	R	K	E	R	A	R	.	S	H	R	F	T	S	I	P	V
Query Conservation																																																																								.
Alig confidence																																														.	.																									.
Template Conservation																																														.	.
Template Sequence		D	Q	S	I	H	I	E	N	L	K	S	E	R	G	K	I	L	D	R	N	N	V	E	L	A	N	T	G	T	A	Y	E	I	G	I	V	P	K	N	V	S	K	K	D	.	.	Y	K	A	I	A	K	E	L	S	I	S	E	D	Y	I	K	Q	Q	M	D	Q	N	W	V	Q	D	D	T	F	V	P	L	K	T
Template Known Secondary structure																				T	T																	G	G	G			T	T	T	.	.									T											T	S	T	T			T	T
Template Predicted Secondary structure																																														.	.
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.			.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	T	N	L	T	E	V	Q	V	A	R	F	A	V	N	Q	Y	R	F	P	G	V	E	V	K	G	Y	K	R	R	Y	Y	P	Y	G	S	A	L	T	H	V	I	G	Y	V	S	K	I	N	D	K	D	V	E	R	L	N	N	D	G	K	L	A	N	Y	A	A	T	H	D	I	G	K	L	G	I	E	R	Y	Y
Query Conservation
Alig confidence														.	.	.	.	.																																												.	.	.	.
Template Conservation														.	.	.	.	.																																												.	.	.	.
Template Sequence		V	K	K	M	D	E	Y	L	S	D	F	A	.	.	.	.	.	K	K	F	H	L	T	T	N	E	T	E	S	R	N	Y	P	L	E	K	A	T	S	H	L	L	G	Y	V	G	P	I	N	S	E	E	L	K	Q	K	E	Y	K	G	.	.	.	.	Y	K	D	D	A	V	I	G	K	K	G	L	E	K	L	Y
Template Known Secondary structure			S			S								.	.	.	.	.			T	T												T	T	G	G	G	G												T	T	G	G	G	S	G	G	G	T	T	.	.	.	.			T	T						S						T
Template Predicted Secondary structure														.	.	.	.	.																																												.	.	.	.
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.						.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.					.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	D	V	L	H	G	Q	T	G	Y	E	E	V	E	V	N	N	R	G	R	V	I	R	Q	L	K	E	V	P	P	Q	A	G	H	D	I	Y	L	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	K	K	L	Q	H	E	D	G	Y	R	V	T	I	V	D	D	S	N	T	I	A	H	T	L	I	E	K	K	K	K	D	G	K	D	I	Q	L	T
Template Known Secondary structure								B																								B
Template Predicted Secondary structure
Template SS confidence
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions