Job Description P0AD65 Confidence 99.87% Date Thu Jan 5 11:20:07 GMT 2012 Rank 53 Aligned Residues 119 % Identity 24% Template d1pyya3 SCOP info Penicillin binding protein dimerisation domain Penicillin binding protein dimerisation domain Penicillin binding protein dimerisation domain Resolution 2.42

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		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	P	S	R	G	I	I	Y	D	R	N	G	I	P	L	A	L	N	R	T	I	Y	Q	I	E	M	M	P	E	K	V	D	N	V	Q	Q	T	L	D	A	L	R	S	V	V	D	L	T	D	D	D	I	A	A	F	R	K	E	R	A	R	S	H	R	F	T	S	I	P	V	K	T	N	L	T	E	V	Q	V	A
Query Conservation
Alig confidence																														.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	A	K	R	G	T	I	Y	D	R	N	G	V	P	I	A	E	D	A	T	S	Y	N	V	Y	A	N	K	.	.	.	.	.	.	.	.	V	A	E	V	F	H	K	Y	L	D	M	E	E	S	Y	V	R	E	Q	L	V	S	F	G	A	K	G	N	G	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure											T	T	S																	.	.	.	.	.	.	.	.									S										T						S	T	T	S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100									.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	F	A	V	N	Q	Y	R	F	P	G	V	E	V	K	G	Y	K	R	R	Y	Y	P	Y	G	S	A	L	T	H	V	I	G	Y	V	S	K	I	N	D	K	D	V	E	R	L	N	N	D	G	K	L	A	N	Y	A	A	T	H	D	I	G	K	L	G	I	E	R	Y	Y	E	D	V	L	H	G	Q	T	G	Y
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	T	Y	A	N	M	M	S	P	N	R	S	Y	P	N	G	Q	F	A	S	S	F	I	G	L	A	Q	L	H	E	N	E	.	.	.	.	.	.	.	.	.	.	.	.	.	D	G	S	K	S	L	L	G	T	S	G	M	E	S	S	L	N	S	I	L	A	G	T	D	D	G
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.		T	T	T									T	T	S	S	S	S													T	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S								S						T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
												159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.														190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
		225	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	V	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	D	V	Y
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		259	260	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions