Job Description P0AD65 Confidence 99.92% Date Thu Jan 5 11:20:07 GMT 2012 Rank 42 Aligned Residues 253 % Identity 17% Template d1o7ea_ SCOP info beta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like beta-Lactamase/D-ala carboxypeptidase Resolution 1.51

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		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	I	Y	L	T	L	D	L	K	L	Q	Q	Y	I	E	T	L	L	A	G	S	R	A	A	V	V	V	T	D	P	R	T	G	G	V	L	A	L	V	S	T	P	S	Y	D	P	N	L	F	V	D	G	I	S	S	K	D	Y	S	A	L	L	N	D	P	N	T	P	L	V	N	R	A	T	Q	G	V	Y	P	P
Query Conservation
Alig confidence																			.	.																			.	.	.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.																			.	.	.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	A	A	I	T	A	A	S	D	F	A	A	L	E	K	A	C	.	.	A	G	R	L	G	V	T	L	L	D	T	A	S	G	R	R	I	G	.	.	.	.	.	.	H	R	Q	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	R	F	P	M
Template Known Secondary structure										S									.	.	T	S									T	T	T						.	.	.	.	.	.		S	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure																			.	.																			.	.	.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40			.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.							.	60	.	.																													.	.	.	.	.
		329	330	.	.	.	.	.	.	.	.	.	340	.	.				.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.					.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.
Predicted Secondary structure																.	.	.																																									.	.	.	.
Query SS confidence																.	.	.																																									.	.	.	.
Query Sequence		A	S	T	V	K	P	Y	V	A	V	S	A	L	S	.	.	.	A	G	V	I	T	R	N	T	T	L	F	D	P	G	W	W	Q	L	P	G	S	E	K	R	Y	R	D	W	K	K	W	G	H	G	R	L	N	V	T	R	.	.	.	.	S	L	E	E	S	A	D	T	F	F	Y	Q	V	A	Y	D	M	G	I
Query Conservation																.	.	.																																									.	.	.	.
Alig confidence																.	.	.																								.	.	.	.														.	.	.	.
Template Conservation																																										.	.	.	.
Template Sequence		C	S	T	F	K	S	M	L	A	A	T	V	L	S	Q	A	E	R	M	P	A	L	L	D	R	R	V	P	V	G	E	A	D	L	L	S	H	A	P	V	.	.	.	.	T	R	R	H	A	G	K	D	M	T	V	R	D	L	C	R	A	T	I	I	T	S	D	N	T	A	A	N	L	L	F	G	V	V	G	G
Template Known Secondary structure		G	G	G	G													T	T		T	T	T	T	T							G	G	G			S	S		T	T	.	.	.	.	G	G	G	G	T	T															S														T
Template Predicted Secondary structure																																										.	.	.	.
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.					.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
			402	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	D	R	L	S	E	W	M	G	K	F	G	Y	G	H	Y	T	G	I	D	L	A	E	E	R	S	G	N	M	P	T	R	E	W	K	Q	K	R	F	K	K	P	W	Y	Q	G	D	T	I	P	V	G	I	G	Q	G	Y	W	T	A	T	P	I	Q	M	S	K	A	L	M	I	L	I	N	D	G	I	V	K	V
Query Conservation		.
Alig confidence		.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.
Template Sequence		P	P	A	V	T	A	F	L	R	A	S	G	D	T	V	S	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	D	R	L	E	P	E	L	N	S	F	A	K	G	D	P	R	D	T	T	T	P	A	A	M	A	A	T	L	Q	R	V	V	L	G	.	.	.	.	.
Template Known Secondary structure													T		S	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T	G	G	G			B	T	T	B		T	T																T	S	.	.	.	.	.
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.																								.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
		481	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Predicted Secondary structure
Query SS confidence
Query Sequence		P	H	L	L	M	S	T	A	E	D	G	K	Q	V	P	W	V	Q	P	H	E	P	P	V	G	D	I	H	S	G	Y	W	E	L	A	K	D	G	M	Y	G	V	A	N	R	P	N	G	T	A	H	K	Y	F	A	S	A	P	Y	K	I	A	A	K	S	G	T	A	Q	V	F	G	L	K	A	N	E	T	Y	N
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.																		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.																		.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	V	L	Q	P	A	S	R	Q	Q	L	A	D	W	L	I	D	N	E	T	G	D	A	C	L	.	.	R	A	G	L	G	K	R	W	R	V	G	D	K	T	G	S	N	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	S														T		S	S		T	T	T		.	.				S		T	T											.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.																		.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																										197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.			.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		561	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.		.	.	.	.	.	.	.	.	610	.	.
Predicted Secondary structure																																											.
Query SS confidence																																											.
Query Sequence		A	H	K	I	A	E	R	L	R	D	H	K	L	M	T	A	F	A	P	Y	N	N	P	Q	V	A	V	A	M	I	L	E	N	G	G	A	G	P	A	V	G	.	T	L	M	R	Q	I	L	D	H	I	M
Query Conservation																																											.
Alig confidence		.	.	.	.	.																																					.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	G	E	D	A	R	N	D	I	A	V	L	W	P	V	A	G	G	A	P	W	V	L	T	A	Y	L	Q	A	G	A	I	S	Y	E	Q	R	A	S	V	L	A	Q	V	G	R	I	A	D
Template Known Secondary structure		.	.	.	.	.	S	S	S											T	T	S	S												T	T	S
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions