Job Description P0AD65 Confidence 99.82% Date Thu Jan 5 11:20:07 GMT 2012 Rank 56 Aligned Residues 251 % Identity 16% Template d1hzoa_ SCOP info beta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like beta-Lactamase/D-ala carboxypeptidase Resolution 1.75

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		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.			.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
Predicted Secondary structure																		.	.
Query SS confidence																		.	.
Query Sequence		K	L	Q	Q	Y	I	E	T	L	L	A	G	S	R	A	A	.	.	V	V	V	T	D	P	R	T	G	G	V	L	A	L	V	S	T	P	S	Y	D	P	N	L	F	V	D	G	I	S	S	K	D	Y	S	A	L	L	N	D	P	N	T	P	L	V	N	R	A	T	Q	G	V	Y	P	P	A	S	T	V	K	P
Query Conservation																		.	.
Alig confidence																		.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	I	E	E	Q	L	N	T	L	E	K	Y	S	Q	G	R	L	G	V	A	L	I	N	T	E	D	N	S	Q	I	T	Y	R	G	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	R	F	A	M	A	S	T	S	K	V
Template Known Secondary structure															T	S									T	T	T	T						S	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S					G	G	G	G
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.																																			.	.	.	.	.	.	.	70	.	.	.
		335	.	.	.	.	340	.	.				.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400		.	.	.	.	.	.	.	.	.	410
Predicted Secondary structure										.	.	.																																																											.
Query SS confidence										.	.	.																																																											.
Query Sequence		Y	V	A	V	S	A	L	S	.	.	.	A	G	V	I	T	R	N	T	T	L	F	D	P	G	W	W	Q	L	P	G	S	E	K	R	Y	R	D	W	K	K	W	G	H	G	R	L	N	V	T	R	S	L	E	E	S	A	D	T	F	F	Y	Q	V	A	Y	D	M	G	.	I	D	R	L	S	E	W	M	G	K
Query Conservation										.	.	.																																																											.
Alig confidence										.	.	.																																																											.
Template Conservation
Template Sequence		M	A	V	A	A	V	L	K	A	S	E	K	Q	A	G	L	L	D	K	N	I	T	I	K	K	S	D	L	V	A	Y	S	P	I	T	E	K	H	L	T	T	G	M	T	L	A	E	L	S	A	A	T	L	Q	Y	S	D	N	T	A	M	N	K	I	L	D	Y	L	G	G	P	A	K	V	T	Q	F	A	R	S
Template Known Secondary structure														S	T	T	G	G	G							G	G	G			S			T	T	G	G	G		T	T	T														T														T	S
Template Predicted Secondary structure
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		411	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Predicted Secondary structure
Query SS confidence
Query Sequence		F	G	Y	G	H	Y	T	G	I	D	L	A	E	E	R	S	G	N	M	P	T	R	E	W	K	Q	K	R	F	K	K	P	W	Y	Q	G	D	T	I	P	V	G	I	G	Q	G	Y	W	T	A	T	P	I	Q	M	S	K	A	L	M	I	L	I	N	D	G	I	V	K	V	P	H	L	L	M	S	T	A	E	D
Query Conservation
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	N	D	V	T	Y	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	D	R	K	E	P	E	L	N	T	A	I	H	G	D	P	R	D	T	T	S	P	I	A	M	A	K	S	L	Q	A	L	T	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T	T		S	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T	G	G	G				T	T			T	T																T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		155	.	.	.	.	160	.																								.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
		491	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	Q	V	P	W	V	Q	P	H	E	P	P	V	G	D	I	H	S	G	Y	W	E	L	A	K	D	G	M	Y	G	V	A	N	R	P	N	G	T	A	H	K	Y	F	A	S	A	P	Y	K	I	A	A	K	S	G	T	A	Q	V	F	G	L	K	A	N	E	T	Y	N	A	H	K	I	A	E	R	L	R	D
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	A	L	G	Q	S	Q	R	Q	Q	L	V	T	W	L	K	G	N	T	T	G	D	N	S	.	.	I	K	A	G	L	P	K	H	W	V	V	G	D	K	T	G	S	G	D	Y	G	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	S														T		S	S		T	T	T	.	.	G	G	G	G	S		T	T	S										T	T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220			.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		571	.	.	.	.	.	.	.		.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.						.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.
Predicted Secondary structure										.																		.	.	.	.	.
Query SS confidence										.																		.	.	.	.	.
Query Sequence		H	K	L	M	T	A	F	A	.	P	Y	N	N	P	Q	V	A	V	A	M	I	L	E	N	G	G	.	.	.	.	.	A	G	P	A	V	G	T	L	M	R	Q	I	L	D	H	I	M	L	G
Query Conservation										.																		.	.	.	.	.
Alig confidence		.								.																		.	.	.	.	.
Template Conservation		.
Template Sequence		.	T	N	D	I	A	V	I	W	P	E	N	H	A	P	L	I	L	V	V	Y	F	T	Q	Q	E	Q	N	A	K	Y	R	K	D	I	I	A	K	A	A	E	I	V	T	K	E	I	S	N	S
Template Known Secondary structure		.										T	T	S												S	S	T	T																					T
Template Predicted Secondary structure		.
Template SS confidence
			244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.

No model constructed - rank, confidence too low

---

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions