Job Description P0AD65 Confidence 99.95% Date Thu Jan 5 11:20:07 GMT 2012 Rank 38 Aligned Residues 255 % Identity 18% Template d1e25a_ SCOP info beta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like beta-Lactamase/D-ala carboxypeptidase Resolution 1.9

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		258	.	260	.	.	.	.	.	.	.	.	.	270	.			.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure																.	.
Query SS confidence																.	.
Query Sequence		L	Q	Q	Y	I	E	T	L	L	A	G	S	R	A	.	.	A	V	V	V	T	D	P	R	T	G	G	V	L	A	L	V	S	T	P	S	Y	D	P	N	L	F	V	D	G	I	S	S	K	D	Y	S	A	L	L	N	D	P	N	T	P	L	V	N	R	A	T	Q	G	V	Y	P	P	A	S	T	V	K	P	Y
Query Conservation																.	.
Alig confidence																.	.															.	.	.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																.	.	.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	K	E	Q	I	E	S	I	V	I	G	K	K	A	T	V	G	V	A	V	W	G	P	D	D	L	E	P	L	L	.	.	.	.	.	.	I	N	P	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	K	F	P	M	Q	S	V	F	K	L	H
Template Known Secondary structure											T	T	S	S	S									T	T		S	S				.	.	.	.	.	.		S	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						G	G	G
Template Predicted Secondary structure																																.	.	.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.							.	60	.	.																													.	.	.	.	.	.	.	70	.	.	.	.
		336	.	.	.	340	.				.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.					.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.		400	.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.																																										.	.	.	.																		.
Query SS confidence								.	.	.																																										.	.	.	.																		.
Query Sequence		V	A	V	S	A	L	.	.	.	S	A	G	V	I	T	R	N	T	T	L	F	D	P	G	W	W	Q	L	P	G	S	E	K	R	Y	R	D	W	K	K	W	G	H	G	R	L	N	V	T	R	.	.	.	.	S	L	E	E	S	A	D	T	F	F	Y	Q	V	A	Y	D	M	.	G	I	D	R	L	S	E	W
Query Conservation								.	.	.																																										.	.	.	.																		.
Alig confidence								.	.	.																																										.	.	.	.																		.
Template Conservation
Template Sequence		L	A	M	L	V	L	H	Q	V	D	Q	G	K	L	D	L	N	Q	T	V	I	V	N	R	A	K	V	L	Q	N	T	W	A	P	I	M	K	A	Y	Q	G	D	E	F	S	V	P	V	Q	Q	L	L	Q	Y	S	V	S	H	S	D	N	V	A	C	D	L	L	F	E	L	V	G	G	P	A	A	L	H	D	Y
Template Known Secondary structure												T	T	S	S		T	T							T	T	T	S			S	S			T					S		S	S																														T
Template Predicted Secondary structure
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		408	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	G	K	F	G	Y	G	H	Y	T	G	I	D	L	A	E	E	R	S	G	N	M	P	T	R	E	W	K	Q	K	R	F	K	K	P	W	Y	Q	G	D	T	I	P	V	G	I	G	Q	G	Y	W	T	A	T	P	I	Q	M	S	K	A	L	M	I	L	I	N	D	G	I	V	K	V	P	H	L	L	M	S	T
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	Q	S	M	G	I	K	E	T	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	V	A	N	E	A	Q	M	H	A	D	D	Q	V	Q	Y	Q	N	W	T	S	M	K	G	A	A	E	I	L	K	K	F	E	Q	K	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure					T	T			S	B		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												T	T	G	G	G	G	S																T	T	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		152	.	.	.	.	.	.	.	160	.																								.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
		488	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	D	G	K	Q	V	P	W	V	Q	P	H	E	P	P	V	G	D	I	H	S	G	Y	W	E	L	A	K	D	G	M	Y	G	V	A	N	R	P	N	G	T	A	H	K	Y	F	A	S	A	P	Y	K	I	A	A	K	S	G	T	A	Q	V	F	G	L	K	A	N	E	T	Y	N	A	H	K	I	A	E	R
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.																															.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.																															.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	Q	L	S	E	T	S	Q	A	L	L	W	K	W	M	V	E	T	T	T	G	.	.	P	E	R	L	K	G	L	L	P	A	G	T	V	V	A	H	K	T	G	T	S	Q	I	K	A	G	K	T	A	A	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S														S			S		.	.	T	T	S	T	T	T	T	S		T	T														T	T					.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.																															.	.	.	.	.	.	.	.	.	.
Template SS confidence
																			197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.			.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
		568	.	570	.	.	.	.	.	.	.	.	.	580	.	.		.	.	.	.	.	.	.	590	.	.	.	.	.						.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.
Predicted Secondary structure																	.														.	.	.	.	.
Query SS confidence																	.														.	.	.	.	.
Query Sequence		L	R	D	H	K	L	M	T	A	F	A	P	Y	N	N	.	P	Q	V	A	V	A	M	I	L	E	N	G	G	.	.	.	.	.	A	G	P	A	V	G	T	L	M	R	Q	I	L	D	H	I	M	L	G
Query Conservation																	.														.	.	.	.	.
Alig confidence		.	.	.	.												.														.	.	.	.	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	T	N	D	L	G	I	I	L	L	P	D	G	R	P	L	L	V	A	V	F	V	K	D	S	A	E	S	S	R	T	N	E	A	I	I	A	Q	V	A	Q	T	A	Y	Q	F	E	L	K	K
Template Known Secondary structure		.	.	.	.										T	T	S														S
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions