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Job DescriptionP0AD65
Confidence97.88%DateThu Jan 5 11:20:07 GMT 2012
Rank83Aligned Residues240
% Identity16%Templatec3ss4C_
PDB info PDB header:hydrolaseChain: C: PDB Molecule:glutaminase c; PDBTitle: crystal structure of mouse glutaminase c, phosphate-bound form
Resolution2.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   256...260.........270.. .......280.........290.........300.........310.........
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Query Sequence  LKLQQYIETLLAGSRAA. . . . . . . . . . . . . . . . VVVTDPRTGGVLALVSTPSYDPNLFVDGISSKDYSALLNDPNTPLVN
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Template Sequence  SHIDELYESAKKQSGGKVADYIPQLAKFSPDLWGVSVCTVDGQRHSIG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  T


SB


SSSS
TT

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   234.....240.........250.........260.........270.........280.
 
   320.........330.........340.........350.........360.........370.........380.........390.
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Query Sequence  RATQGVYPPASTVKPYVAVSALSAGVITRNTTLFDPGWWQLPGSEKRYRDWKKWGHGRLNVTRSLEESADTF. . . . . . . .
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Template Sequence  . DTKVPFCLQSCVKPLKYAIAVNDL. . GTEYVHRYVGK. . . . . EPSGFLNEDDKPHNPMVNAGAIVVTSLIKQGVNNAEK
Template Known Secondary structure  .S
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   282.......290.........300..... ....310...... ...320.........330.........340.........350...
 
   392....... 400.........410.........420.........430.........440.......
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Query Sequence  . . . FYQVAYDM. . . . . . . . . . . . . . . . . . . . . GIDRLSEWMGKFGYGHYTGIDLAEERSGNMPTREWKQKRFKKPWYQGD
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Template Sequence  FDYVMQFLNKMAGNEYVGFSNATFQSERESGDRNFAIGYYLKEKKC. . . . . . . FPEGT. . . . . . . . . . . . . . . . . . DMVG
Template Known Secondary structure  TTT



TT
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   360.........370.........380.........390.........400..... ....410 ....
 
   448.450.........460.........470.........480.........490.........500.........510.........520.......
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Query Sequence  TIPVGIGQGYWTATPIQMSKALMILINDGIVKVPHLLMSTAEDGKQVPWVQPHEPPVGDIHSGYWELAKDGMYGVANRPN
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Template Sequence  ILDFYFQLCSIEVTCESASVMAATLANGG. . . . . . . . . . . . . . . . . . . . . FCPITGERVLSPEAVRNTLSLMHSCGMY. D
Template Known Secondary structure  T
TTT.....................B
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   415....420.........430.........440... ......450.........460.........470. .
 
   528.530.........540.........550.........560.........570.........580.........590.. .......600. ...
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Query Sequence  GTAHKYFASAPYKIAAKSGTAQVFGLKANETYNAHKIAERLRDHKLMTAFAPYNNPQVAVAMILE. . NGGAGPAVG. TLM
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Template Sequence  FSGQFAFH. . . VGLPAKSGVA. . . . . . . . . . . . . . . . . . . . . . . GGILLVVP. . . NVMGMMCWSPPLDKMGNSVKGIHFC
Template Known Secondary structure  G...T
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TT.......................ST...TT
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   473......480 .........490 ........ .500.........510.........520...
 
   605....610.
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Query Sequence  RQILDHI
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Template Sequence  HDLVSLC
Template Known Secondary structure  B
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   524.....530
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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