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Job DescriptionP0AD65
Confidence100.00%DateThu Jan 5 11:20:07 GMT 2012
Rank27Aligned Residues220
% Identity22%Templatec3hbrD_
PDB info PDB header:hydrolaseChain: D: PDB Molecule:oxa-48; PDBTitle: crystal structure of oxa-48 beta-lactamase
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  RAAVVVTDPRTGGVLALVSTPSYDPNLFVDGISSKDYSALLNDPNTPLVNRATQGVYPPASTVKPYVAVSALSAGVITRN
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Template Sequence  QGVVVLWNEQQGFT. . . . . . . . NNLK. . . . . . . . . . . . . . . . . . . . . . . . RANQA. FLPASTFIP. NSLIALDLGVVKDE
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TT........................GGG
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Query Sequence  TTLFDPGWWQLPGSEKRYRDWKKWGHGRLNVTRSLEESADTFFYQVAYDMGIDRLSEWMGKFGYGHYTGIDLAEERSGNM
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Template Sequence  HQVFK. . . . . WDGQTRDIATW. . . . NRDHNLITAMKYSVVPVYQEFARQIGEARMSKMLHAFDYGNE. . . DISGNV. . . .
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   90.... .....100..... ....110.........120.........130.........140....... ..150...
 
   430.........440.........450.........460.........470.........480.........490.........500.........
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Query Sequence  PTREWKQKRFKKPWYQGDTIPVGIGQGYWTATPIQMSKALMILINDGIVKVPHLLMSTAEDGKQVPWVQPHEPPVGDIHS
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Template Sequence  . . . . . . . . . . . . . . . . . . . . DSFWLDGGIRISATEQISFLRKLYHNKL. . . . . . . . . . . . . . . . . . . . . . . . . . . . HVSE
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   154.....160.........170.........180. ....
 
   510.........520.........530.........540.........550.........560.........570.........580.........
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Query Sequence  GYWELAKDGMYGVANRPNGTAHKYFASAPYKIAAKSGTAQVFGLKANETYNAHKIAERLRDHKLMTAFAPYNNPQVAVAM
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Template Sequence  RSQRIVKQAMLTEANGD. . . . . . . . . . . . YIIRAKTGYSTR. . . . . . . . . . . . . . . . IEPKIGWWVGWVELDDNVWFFAM
Template Known Secondary structure  T
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   186...190.........200.. .......210.... .....220.........230.......
 
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Query Sequence  ILENGG. . AGPAVGTLMRQILDHIMLGD
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Template Sequence  NMDMPTSDGLGLRQAITKEVLKQEKIIP
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SSGGGTTTTS

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   238.240.........250.........260.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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