Job Description P0AD65 Confidence 98.39% Date Thu Jan 5 11:20:07 GMT 2012 Rank 75 Aligned Residues 110 % Identity 19% Template c3a3jA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:pbp5; PDBTitle: crystal structures of penicillin binding protein 5 from2 haemophilus influenzae Resolution 2.15 Å

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		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.				340	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																						.	.	.
Query SS confidence																																																																						.	.	.
Query Sequence		A	V	V	V	T	D	P	R	T	G	G	V	L	A	L	V	S	T	P	S	Y	D	P	N	L	F	V	D	G	I	S	S	K	D	Y	S	A	L	L	N	D	P	N	T	P	L	V	N	R	A	T	Q	G	V	Y	P	P	A	S	T	V	K	P	Y	V	A	V	S	.	.	.	A	L	S	A	G	V	I	T	R
Query Conservation																																																																						.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	Y	V	L	M	D	Y	N	S	G	A	I	L	T	A	L	N	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	Q	R	Q	Y	P	A	S	L	T	K	M	M	T	S	Y	V	V	G	V	A	L	K	Q	G	K	I	H	N
Template Known Secondary structure								T	T	T								S	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S		B			G	G	G															T	T	S	S		T
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.																																		.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		349	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.					380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400							.	.	.	.	.	.	.	.	.	410	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.																						.	.	.	.	.	.
Query SS confidence																																	.	.	.	.																						.	.	.	.	.	.
Query Sequence		N	T	T	L	F	D	P	G	W	W	Q	L	P	G	S	E	K	R	Y	R	D	W	K	K	W	G	H	G	R	L	N	.	.	.	.	V	T	R	S	L	E	E	S	A	D	T	F	F	Y	Q	V	A	Y	D	M	G	.	.	.	.	.	.	I	D	R	L	S	E	W	M	G	K	F	G	Y	G	H
Query Conservation																																	.	.	.	.																						.	.	.	.	.	.
Alig confidence																													.				.	.	.	.																						.	.	.	.	.	.
Template Conservation																													.
Template Sequence		T	D	M	V	T	I	G	E	S	A	W	G	R	N	F	P	D	S	S	K	M	F	L	D	L	N	T	.	Q	V	S	V	A	D	L	N	R	G	V	I	V	V	S	G	N	D	A	T	V	A	L	A	E	H	I	S	G	N	V	P	N	F	V	E	T	M	N	K	Y	V	Q	Q	F	G	L	K	N
Template Known Secondary structure		T							T	T	T		G	G	G		T	T	S							T	T		.																													S	S															T	T		S	S
Template Predicted Secondary structure																													.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.		.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions